RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PARM1Q6UWI2 310 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 SSX6Q7RTT6 188 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 FAM3CQ92520 227 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 FGF14Q92915 247 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 RERGQ96A58 199 aaPredicted RBP14.07□□□□□ -0.16
DDX56-201ENST00000258772 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 NPFFR2Q9Y5X5 522 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 A0A1B0GWA3 101 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 ERVH48-1M5A8F1 160 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 RAB3BP20337 219 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 HTR2BP41595 481 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 CAPZA2P47755 286 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 SRP9P49458 86 aaKnown RBP14.06□□□□□ -0.16
DDX56-201ENST00000258772 SNRPD2P62316 118 aaKnown RBP14.06□□□□□ -0.16
DDX56-201ENST00000258772 ACTC1P68032 377 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 ACTA1P68133 377 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 FHL1Q13642 323 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 GPR18Q14330 331 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 NTRK2Q16620 822 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 SLC36A2Q495M3 483 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 KRT74Q7RTS7 529 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 OR13C5Q8NGS8 318 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 ASB12Q8WXK4 309 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 SNAPC3Q92966 411 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 CTHRC1Q96CG8 243 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 BMFQ96LC9 184 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 PTCHD1Q96NR3 888 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 GABRG3Q99928 467 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 POLE3Q9NRF9 147 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 A0A1W2PQF6 199 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 RASGRP1O95267 797 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 NGFRP08138 427 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 PVRP15151 417 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 COL9A1P20849 921 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 GPLD1P80108 840 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 POU4F2Q12837 409 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 BCL2L15Q5TBC7 163 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 HACD4Q5VWC8 232 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 OR5H6Q8NGV6 325 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 MYADMQ96S97 322 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 ZNF426Q9BUY5 554 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 IGFLR1Q9H665 355 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 MCCC2Q9HCC0 563 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 ST6GALNAC2Q9UJ37 374 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 HSPB11Q9Y547 144 aa14.06□□□□□ -0.16
DDX56-201ENST00000258772 ADAM11O75078 769 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 NKX2-2O95096 273 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 DHFRP00374 187 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 SLC6A6P31641 620 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 LSSP48449 732 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 HCCSP53701 268 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 FAM205BPQ63HN1 556 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 FAM109BQ6ICB4 259 aaPredicted RBP14.05□□□□□ -0.16
DDX56-201ENST00000258772 ZC3H14Q6PJT7 736 aaKnown RBP14.05□□□□□ -0.16
DDX56-201ENST00000258772 CREB3L2Q70SY1 520 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 RFLNBQ8N5W9 214 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 ZNF614Q8N883 585 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 OR7G1Q8NGA0 311 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 RSC1A1Q92681 617 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 HYLS1Q96M11 299 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 CAPN10Q9HC96 672 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 EVA1BQ9NVM1 165 aa14.05□□□□□ -0.16
DDX56-201ENST00000258772 TRAV1-2A0A0B4J238 106 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 A0A1W2PRG6 482 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 APBB3O95704 486 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 IFNGP01579 166 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 ACAA2P42765 397 aaKnown RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 FCN2Q15485 313 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 ARHGAP11AQ6P4F7 1023 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 CA13Q8N1Q1 262 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 ARL14Q8N4G2 192 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 HSD17B8Q92506 261 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 ANKRD9Q96BM1 317 aaPredicted RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 SCMH1Q96GD3 660 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 MED28Q9H204 178 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 EVA1AQ9H8M9 152 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 NUDT15Q9NV35 164 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 SERTAD3Q9UJW9 196 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 TRANK1O15050 2925 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 TRAV6A0A075B6T7 132 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 A0A1W2PPK0 400 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 MAGEB4O15481 346 aaPredicted RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 OGG1O15527 345 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 FABP7O15540 132 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 GALR3O60755 368 aaPredicted RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 CBX7O95931 251 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 IFI6P09912 130 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 RBM34P42696 430 aaKnown RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 EMDP50402 254 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 TP53I3Q53FA7 332 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 ALG10BQ5I7T1 473 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 DGAT2L6Q6ZPD8 337 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 GRAMD2AQ8IUY3 354 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 GHDCQ8N2G8 530 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 OR52R1Q8NGF1 315 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 OR52E2Q8NGJ4 325 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 BAHD1Q8TBE0 780 aaPredicted RBP14.04□□□□□ -0.16
DDX56-201ENST00000258772 THAP4Q8WY91 577 aa14.04□□□□□ -0.16
DDX56-201ENST00000258772 HOXB13Q92826 284 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms