RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 NKX6-2Q9C056 277 aaPredicted RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 HRH4Q9H3N8 390 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 HRASLSQ9HDD0 168 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 PRMT8Q9NR22 394 aaPredicted RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 CA10Q9NS85 328 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 MEIKINA0A087WXM9 373 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ZNF98A6NK75 572 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 IGF2P01344 180 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 IFNA6P05013 189 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 CHRM4P08173 479 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ZP3P21754 424 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 PRMT2P55345 433 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 GAS6Q14393 721 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ZNF273Q14593 569 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 CLRN3Q8NCR9 226 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 SCARB1Q8WTV0 552 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ELP4Q96EB1 424 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 MED18Q9BUE0 208 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ZNF350Q9GZX5 532 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ATG5Q9H1Y0 275 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ZNF175Q9Y473 711 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 TMPRSS11DO60235 418 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 RPN2P04844 631 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 PPP3CBP16298 524 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ZNF14P17017 642 aaPredicted RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 TBXA2RP21731 343 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 CCR9P51686 369 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 AIMP2Q13155 320 aaKnown RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 BIKQ13323 160 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 CD163Q86VB7 1156 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 JAGN1Q8N5M9 183 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 GATSQ8NAP1 163 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 YIPF5Q969M3 257 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 SCMH1Q96GD3 660 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 GPR55Q9Y2T6 319 aaPredicted RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 WNT6Q9Y6F9 365 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 SLC22A23A1A5C7 686 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 TTLL8A6PVC2 850 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 GPR31O00270 319 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 AMY2AP04746 511 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 ATP1B1P05026 303 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 ATP5A1P25705 553 aaKnown RBP11.46□□□□□ -0.57
USP30-201ENST00000257548 ITPKBP27987 946 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 HTR1FP30939 366 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 RPS27P42677 84 aaKnown RBP11.46□□□□□ -0.57
USP30-201ENST00000257548 UBE2IP63279 158 aaKnown RBP11.46□□□□□ -0.57
USP30-201ENST00000257548 PAN3Q58A45 887 aaKnown RBP11.46□□□□□ -0.57
USP30-201ENST00000257548 PDSS1Q5T2R2 415 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 GLT8D1Q68CQ7 371 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 TSSK4Q6SA08 328 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 LRRC56Q8IYG6 542 aaPredicted RBP11.46□□□□□ -0.57
USP30-201ENST00000257548 SDR16C5Q8N3Y7 309 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 OR10R2Q8NGX6 335 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 TM4SF18Q96CE8 201 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 WDR89Q96FK6 387 aaPredicted RBP11.46□□□□□ -0.57
USP30-201ENST00000257548 ABT1Q9ULW3 272 aaKnown RBP11.46□□□□□ -0.57
USP30-201ENST00000257548 PRSS44E7EML9 344 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 OR10H2O60403 315 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 IGLV3-27P01718 113 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 CERS1P27544 350 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 TAS2R43P59537 309 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 PRRT3Q5FWE3 981 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 LY6G5CQ5SRR4 150 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 AMER3Q8N944 861 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 PFN4Q8NHR9 129 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 SLC6A7Q99884 636 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 PTDSS2Q9BVG9 487 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 ASB6Q9NWX5 421 aa11.46□□□□□ -0.57
USP30-201ENST00000257548 LRIT2A6NDA9 550 aa11.46□□□□□ -0.58
USP30-201ENST00000257548 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.58
USP30-201ENST00000257548 AKR1C4P17516 323 aa11.46□□□□□ -0.58
USP30-201ENST00000257548 DDX6P26196 483 aaKnown RBP eCLIP11.46□□□□□ -0.58
USP30-201ENST00000257548 CCND3P30281 292 aaPredicted RBP11.46□□□□□ -0.58
USP30-201ENST00000257548 PRKXP51817 358 aa11.46□□□□□ -0.58
USP30-201ENST00000257548 HLXQ14774 488 aaPredicted RBP11.46□□□□□ -0.58
USP30-201ENST00000257548 SLC16A13Q7RTY0 426 aa11.46□□□□□ -0.58
USP30-201ENST00000257548 RTN4RL1Q86UN2 441 aaPredicted RBP11.46□□□□□ -0.58
USP30-201ENST00000257548 SLC16A11Q8NCK7 471 aa11.46□□□□□ -0.58
USP30-201ENST00000257548 CDS1Q92903 461 aa11.46□□□□□ -0.58
USP30-201ENST00000257548 ZNF689Q96CS4 500 aaPredicted RBP11.46□□□□□ -0.58
USP30-201ENST00000257548 HS6ST2Q96MM7 605 aa11.46□□□□□ -0.58
USP30-201ENST00000257548 USB1Q9BQ65 265 aaKnown RBP11.46□□□□□ -0.58
USP30-201ENST00000257548 EVA1AQ9H8M9 152 aa11.46□□□□□ -0.58
USP30-201ENST00000257548 K7ESM1 405 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 TYRP14679 529 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 SYN1P17600 705 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 DEFB134Q4QY38 66 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 OR51S1Q8NGJ8 323 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 CXorf40AQ8TE69 158 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 LGR4Q9BXB1 951 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 MRPS30Q9NP92 439 aaKnown RBP11.45□□□□□ -0.58
USP30-201ENST00000257548 SIDT1Q9NXL6 827 aaKnown RBP11.45□□□□□ -0.58
USP30-201ENST00000257548 SEMA7AO75326 666 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 CXCL2P19875 107 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 PCBP3P57721 371 aaKnown RBP11.45□□□□□ -0.58
USP30-201ENST00000257548 KCNAB1Q14722 419 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 KLHL26Q53HC5 615 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 C1orf94Q6P1W5 598 aa11.45□□□□□ -0.58
USP30-201ENST00000257548 METTL3Q86U44 580 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms