RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ACO2Q99798 780 aaKnown RBP6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 NOX3Q9HBY0 568 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 ANKRD36CQ5JPF3 1778 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 NPIPB9F8W1W9 429 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 VEGFDO43915 354 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 RGS11O94810 467 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC16A8O95907 504 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 SHMT2P34897 504 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CCR10P46092 362 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 RGS4P49798 205 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MAXP61244 160 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 NPY5RQ15761 445 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 LBX2Q6XYB7 198 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MISPQ8IVT2 679 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ACBD7Q8N6N7 88 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM161BQ8NDZ6 487 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 OR10G2Q8NGC3 310 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC35F5Q8WV83 523 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MBD3L1Q8WWY6 194 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 HAS2Q92819 552 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CD101Q93033 1021 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 SFRP2Q96HF1 295 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TAS2R16Q9NYV7 291 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 KCNIP1Q9NZI2 227 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 KLHL9Q9P2J3 617 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CLDN16Q9Y5I7 305 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MYH7BA7E2Y1 1941 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 A0A1W2PN81 502 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 XKRY2A2RUG3 117 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 K7EQM0 130 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 FAAHO00519 579 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 GNG7O60262 68 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CTSAP10619 480 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CCND3P30281 292 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CD80P33681 288 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CHRNA7P36544 502 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ATP4BP51164 291 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ERVPABLB-1P60509 514 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CHRFAM7AQ494W8 412 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 HIKESHIQ53FT3 197 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 EOGTQ5NDL2 527 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 KIAA0319Q5VV43 1072 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CST9LP1Q5W188 147 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 OR5M10Q6IEU7 315 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MON1BQ7L1V2 547 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 RBM45Q8IUH3 476 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 Q8NFD4 153 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 BBS10Q8TAM1 723 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 LINC01599Q8WXQ3 324 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MISP3Q96FF7 219 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM176AQ96HP8 235 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 FCRL4Q96PJ5 515 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 PITX2Q99697 317 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 COLEC11Q9BWP8 271 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 A4GNTQ9UNA3 340 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 GLI3P10071 1580 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 SCN7AQ01118 1682 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 N4BP2Q86UW6 1770 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ITGB4P16144 1822 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 IGLV3-22A0A075B6J6 115 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TCRBV7S2A1N4TA0A589 114 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 M0R2N6 131 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 GAAP10253 952 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 MTHFD2P13995 350 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TACR3P29371 465 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 KIR2DL3P43628 341 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 LHX1P48742 406 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 GP2P55259 537 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 GRM3Q14832 879 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF691Q5VV52 312 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ABHD15Q6UXT9 468 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF621Q6ZSS3 439 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ADCK2Q7Z695 626 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ABRAQ8N0Z2 381 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF709Q8N972 641 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM71CQ8NEG0 241 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 OR56A1Q8NGH5 318 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 C1QTNF6Q9BXI9 259 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM231Q9H6L2 316 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CBLN4Q9NTU7 201 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 BTRCQ9Y297 605 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CDH10Q9Y6N8 788 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 NUP98P52948 1817 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 DDX60Q8IY21 1712 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 LINC01387J3KSC0 135 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 NXPH2O95156 264 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 OR8U9P0C7N5 309 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 AMD1P17707 334 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CKS1BP61024 79 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 CTF1Q16619 201 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 ZMIZ2Q8NF64 920 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 M1APQ8TC57 530 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 KCNE4Q8WWG9 221 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 FBXO17Q96EF6 278 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 BTN2A3PQ96KV6 586 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 FZD4Q9ULV1 537 aa6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 EXOSC1Q9Y3B2 195 aaKnown RBP6.33□□□□□ -1.4
PDGFRA-201ENST00000257290 TOGARAM1Q9Y4F4 1720 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms