RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CHD5Q8TDI0 1954 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 A0A1W2PN81 502 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 ARRDC5A6NEK1 342 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 SEC14L6B5MCN3 397 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 LRRTM2O43300 516 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 SH3BGRLO75368 114 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 GIFP27352 417 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 PPP2R1BP30154 601 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 CHRNA7P36544 502 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 MAP3K8P41279 467 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 STAT5AP42229 794 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 GLP1RP43220 463 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 NPBWR1P48145 328 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 IDH2P48735 452 aaKnown RBP11□□□□□ -0.65
CCNA1-201ENST00000255465 CTBP2P56545 445 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 TRAM1Q15629 374 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 SF1Q15637 639 aaKnown RBP11□□□□□ -0.65
CCNA1-201ENST00000255465 CHRFAM7AQ494W8 412 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 CERCAMQ5T4B2 595 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 FAM199XQ6PEV8 388 aaPredicted RBP11□□□□□ -0.65
CCNA1-201ENST00000255465 IQCHQ86VS3 1027 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 ETFBKMTQ8IXQ9 262 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 FAM98AQ8NCA5 519 aaKnown RBP11□□□□□ -0.65
CCNA1-201ENST00000255465 HUS1BQ8NHY5 278 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 VOPP1Q96AW1 172 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 WRAP53Q9BUR4 548 aaKnown RBP11□□□□□ -0.65
CCNA1-201ENST00000255465 FAM117AQ9C073 453 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 POPDC3Q9HBV1 291 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 PARD6AQ9NPB6 346 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 NTMQ9P121 344 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 SLC35A3Q9Y2D2 325 aa11□□□□□ -0.65
CCNA1-201ENST00000255465 SF3B6Q9Y3B4 125 aaKnown RBP11□□□□□ -0.65
CCNA1-201ENST00000255465 DNMT3AQ9Y6K1 912 aaPredicted RBP11□□□□□ -0.65
CCNA1-201ENST00000255465 ELOA3CA0A087WX78 387 aaPredicted RBP10.99□□□□□ -0.65
CCNA1-201ENST00000255465 A6NCN8 305 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 CTDSPLO15194 276 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 TSPAN3O60637 253 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 SOD1P00441 154 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 THBS1P07996 1170 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 RD3LP0DJH9 198 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 HKR1P10072 659 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 NQO2P16083 231 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 DRD1P21728 446 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 NMBRP28336 390 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 CCR1P32246 355 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 AVPR1BP47901 424 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 MMP15P51511 669 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 SOX8P57073 446 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 PPIAP62937 165 aaKnown RBP10.99□□□□□ -0.65
CCNA1-201ENST00000255465 MESP2Q0VG99 397 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 ZNF345Q14585 488 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 HAGHQ16775 308 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.99□□□□□ -0.65
CCNA1-201ENST00000255465 KIAA0930Q6ICG6 404 aaPredicted RBP10.99□□□□□ -0.65
CCNA1-201ENST00000255465 CDC73Q6P1J9 531 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 GLDNQ6ZMI3 551 aaPredicted RBP10.99□□□□□ -0.65
CCNA1-201ENST00000255465 ZNF813Q6ZN06 617 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 ASB18Q6ZVZ8 466 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 CBLL1Q75N03 491 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 SERPINA11Q86U17 422 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 TMEM200AQ86VY9 491 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 STK40Q8N2I9 435 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 SYT14Q8NB59 555 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 PPHLN1Q8NEY8 458 aaKnown RBP10.99□□□□□ -0.65
CCNA1-201ENST00000255465 OR4K15Q8NH41 348 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 HSD17B8Q92506 261 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 MRGPRX4Q96LA9 322 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 S100A13Q99584 98 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 TGIF2Q9GZN2 237 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 C20orf85Q9H1P6 137 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 PIGVQ9NUD9 493 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 GIMAP2Q9UG22 337 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 NEU3Q9UQ49 428 aa10.99□□□□□ -0.65
CCNA1-201ENST00000255465 MRPS18CQ9Y3D5 142 aaKnown RBP10.99□□□□□ -0.65
CCNA1-201ENST00000255465 ZAR1LA6NP61 321 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 CLIC1O00299 241 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 MID1O15344 667 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 FGF16O43320 207 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 CREBL2O60519 120 aaPredicted RBP10.98□□□□□ -0.65
CCNA1-201ENST00000255465 AGR2O95994 175 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 ARL4AP40617 200 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 CDKN1BP46527 198 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 CXCR3P49682 368 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 ANXA11P50995 505 aaKnown RBP10.98□□□□□ -0.65
CCNA1-201ENST00000255465 CCR4P51679 360 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 MRPS11P82912 194 aaKnown RBP10.98□□□□□ -0.65
CCNA1-201ENST00000255465 SKP2Q13309 424 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 NDUFAF6Q330K2 333 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 MPPE1Q53F39 396 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 AKIRIN2Q53H80 203 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 IDNKQ5T6J7 187 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 C9orf64Q5T6V5 341 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 HIST2H3PS2Q5TEC6 136 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 LYPD4Q6UWN0 246 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 RNF165Q6ZSG1 346 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 PARGQ86W56 976 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 OR1J4Q8NGS1 313 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 GCDHQ92947 438 aaPredicted RBP10.98□□□□□ -0.65
CCNA1-201ENST00000255465 TMEM203Q969S6 136 aa10.98□□□□□ -0.65
CCNA1-201ENST00000255465 C12orf66Q96MD2 445 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms