RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 PNLIPRP2P54317 469 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 PRKCDQ05655 676 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 ST3GAL4Q11206 333 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF846Q147U1 533 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 TBCEQ15813 527 aaPredicted RBP17.3■□□□□ 0.36
TRIM47-201ENST00000254816 CDCP2Q5VXM1 449 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 RNF113BQ8IZP6 322 aaKnown RBP17.3■□□□□ 0.36
TRIM47-201ENST00000254816 PRSS33Q8NF86 280 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 SLC35B4Q969S0 331 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 CDC6Q99741 560 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 PALMDQ9NP74 551 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 ERGIC3Q9Y282 383 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 MED31Q9Y3C7 131 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 NPFFR2Q9Y5X5 522 aa17.3■□□□□ 0.36
TRIM47-201ENST00000254816 PTHP01270 115 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 ADRA2AP08913 450 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF12P17014 697 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 GADD45AP24522 165 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 PCOLCEQ15113 449 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 ULK3Q6PHR2 472 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 TIPARPQ7Z3E1 657 aaKnown RBP17.29■□□□□ 0.36
TRIM47-201ENST00000254816 TP53INP1Q96A56 240 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 COX4I2Q96KJ9 171 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 KRCC1Q9NPI7 259 aaPredicted RBP17.29■□□□□ 0.36
TRIM47-201ENST00000254816 NCDNQ9UBB6 729 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 OTOGLQ3ZCN5 2332 aa17.29■□□□□ 0.36
TRIM47-201ENST00000254816 SCO2O43819 266 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 PRKYO43930 277 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 SULT1C4O75897 302 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 MT-CO3P00414 261 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 CELA2AP08217 269 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 OCM2P0CE71 109 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 OCMP0CE72 109 aaPredicted RBP17.28■□□□□ 0.36
TRIM47-201ENST00000254816 CLK1P49759 484 aaKnown RBP17.28■□□□□ 0.36
TRIM47-201ENST00000254816 NRG3P56975 720 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 FBXW4P57775 412 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 RAB15P59190 212 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 COPZ1P61923 177 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF117Q03924 483 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 CSRP2Q16527 193 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 SLC30A6Q6NXT4 461 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 FCGR1BQ92637 280 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 BPIFA2Q96DR5 249 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 ZHX1-C8orf76Q96EF9 292 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 TSSK6Q9BXA6 273 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 HMG20AQ9NP66 347 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 DNAJC27Q9NZQ0 273 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 UNC119BA6NIH7 251 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 AIREO43918 545 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 CH25HO95992 272 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 ADORA3P0DMS8 318 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 GRK5P34947 590 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 RPS18P62269 152 aaKnown RBP17.28■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF620Q6ZNG0 422 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 NUBPLQ8TB37 319 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 SAMD8Q96LT4 415 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 TAAR9Q96RI9 348 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 TBL1XR1Q9BZK7 514 aa17.28■□□□□ 0.36
TRIM47-201ENST00000254816 NDUFB5O43674 189 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 ENTPD6O75354 484 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 BMP4P12644 408 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 SMSP52788 366 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 RGS21Q2M5E4 152 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 BTBD16Q32M84 506 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 SLC27A4Q6P1M0 643 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 LINC00114Q6XXX2 140 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF440Q8IYI8 595 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 OR13C2Q8NGS9 318 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 OR4Q3Q8NH05 313 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 C3orf49Q96BT1 292 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 DEPDC7Q96QD5 511 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 ZNF426Q9BUY5 554 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 SLIRPQ9GZT3 109 aaKnown RBP17.27■□□□□ 0.36
TRIM47-201ENST00000254816 CLN6Q9NWW5 311 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 IL20Q9NYY1 176 aa17.27■□□□□ 0.36
TRIM47-201ENST00000254816 C9orf172C9J069 976 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 HCRTR2O43614 444 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 TLX2O43763 284 aaPredicted RBP17.27■□□□□ 0.35
TRIM47-201ENST00000254816 MPZL2O60487 215 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 HNRNPCP07910 306 aaKnown RBP eCLIP17.27■□□□□ 0.35
TRIM47-201ENST00000254816 HSMCR30P0CW71 290 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 SAGP10523 405 aaPredicted RBP17.27■□□□□ 0.35
TRIM47-201ENST00000254816 EVI2BP34910 448 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 SERPINB10P48595 397 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 FXYD6P3P58550 94 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 SOWAHCQ53LP3 525 aaPredicted RBP17.27■□□□□ 0.35
TRIM47-201ENST00000254816 CACTIN-AS1Q8N1I8 211 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 MFSD4AQ8N468 514 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 OR2Y1Q8NGV0 311 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 CHPT1Q8WUD6 406 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 LIN37Q96GY3 246 aaPredicted RBP17.27■□□□□ 0.35
TRIM47-201ENST00000254816 HS6ST2Q96MM7 605 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 ENKD1Q9H0I2 346 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 DCSTAMPQ9H295 470 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 RNF167Q9H6Y7 350 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 SLC25A19Q9HC21 320 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 GPR52Q9Y2T5 361 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 HS3ST3B1Q9Y662 390 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 EML6Q6ZMW3 1958 aa17.27■□□□□ 0.35
TRIM47-201ENST00000254816 LOC102723996A0A087X1L8 192 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms