RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 PTTG1O95997 202 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 ALAS2P22557 587 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 SLC37A1P57057 533 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 CSTF1Q05048 431 aaKnown RBP23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 ARHGAP11AQ6P4F7 1023 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 CARFQ8N187 725 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 GALNT6Q8NCL4 622 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 ASB6Q9NWX5 421 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 ICAM5Q9UMF0 924 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 SPAG17Q6Q759 2223 aa23.13■■□□□ 1.29
TMEM55B-201ENST00000250489 A0A087WUJ7 227 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 NUDT21O43809 227 aaKnown RBP23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 REM1O75628 298 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 HLA-DPB1P04440 258 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 CD97P48960 835 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 ARL4DP49703 201 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 RPS7P62081 194 aaKnown RBP23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 DNAJA4Q8WW22 397 aaPredicted RBP23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 HTRA1Q92743 480 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 SGTBQ96EQ0 304 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 MVB12AQ96EY5 273 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 OR1F2PQ96R84 312 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 TBX5Q99593 518 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 INPP5EQ9NRR6 644 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 POLR1CO15160 346 aaPredicted RBP23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 GAAP10253 952 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 ZNF440Q8IYI8 595 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 CYB561A3Q8NBI2 242 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 FAM71CQ8NEG0 241 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 OR1L3Q8NH93 324 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 TSLPQ969D9 159 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 MIXL1Q9H2W2 232 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 BABAM2Q9NXR7 383 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 DHCR7Q9UBM7 475 aaKnown RBP23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 SERTAD3Q9UJW9 196 aa23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 TP53BP1Q12888 1972 aaPredicted RBP23.12■■□□□ 1.29
TMEM55B-201ENST00000250489 IGKV3D-11A0A0A0MRZ8 115 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 DAPL1A0PJW8 107 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 GABRPO00591 440 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 CLUP10909 449 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 SLC16A1P53985 500 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 GALEQ14376 348 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 FNDC7Q5VTL7 733 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 MARCH9Q86YJ5 346 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 TMEM151BQ8IW70 566 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 SLC35F3Q8IY50 421 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 OR10H4Q8NGA5 316 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 C3orf49Q96BT1 292 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 CLIP3Q96DZ5 547 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 HDHD5Q9BXW7 423 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 ABCB9Q9NP78 766 aa23.11■■□□□ 1.29
TMEM55B-201ENST00000250489 A8MUA0 341 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 BCAT2O15382 392 aaPredicted RBP23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 DUX1O43812 170 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 NDUFB2O95178 105 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 IFNGP01579 166 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 PPICP45877 212 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 AFF3P51826 1226 aaKnown RBP23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 PLXDC1Q8IUK5 500 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 SLC46A1Q96NT5 459 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 ERMAPQ96PL5 475 aaPredicted RBP23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 HOXD1Q9GZZ0 328 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 ADGRL4Q9HBW9 690 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 C14orf119Q9NWQ9 140 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 CHRNA9Q9UGM1 479 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 FBXL4Q9UKA2 621 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 SMIM30A4D0T7 59 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 IL33O95760 270 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 DLGAP3O95886 979 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 MRPL3P09001 348 aaKnown RBP23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 SBK2P0C263 348 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 CSF2RBP32927 897 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 DEFA1P59665 94 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 DEFA3P59666 94 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 GPR50Q13585 617 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 ZNF79Q15937 498 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 SNAP47Q5SQN1 464 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 PRAMEF17Q5VTA0 474 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 SLC25A45Q8N413 288 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 D2HGDHQ8N465 521 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 OR5M3Q8NGP4 307 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 NXF5Q9H1B4 397 aaKnown RBP23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 UBQLN4Q9NRR5 601 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 HAO2Q9NYQ3 351 aa23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 MN1Q10571 1320 aaPredicted RBP23.1■■□□□ 1.29
TMEM55B-201ENST00000250489 SPNP16150 400 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 ADH7P40394 386 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 CD226Q15762 336 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 LRRC17Q8N6Y2 441 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 GATSQ8NAP1 163 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 OIT3Q8WWZ8 545 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 AP3S1Q92572 193 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 CLDN23Q96B33 292 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 ART5Q96L15 291 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 OR8D2Q9GZM6 311 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 POLHQ9Y253 713 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 SIRT4Q9Y6E7 314 aaPredicted RBP23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 A0A1W2PQL4 384 aaPredicted RBP23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 LRRN3E7EW58 273 aa23.09■■□□□ 1.29
TMEM55B-201ENST00000250489 CASKO14936 926 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms