RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ST8SIA2Q92186 375 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 SLA2Q9H6Q3 261 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 ADGRL4Q9HBW9 690 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 ADAP2Q9NPF8 381 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 ASB6Q9NWX5 421 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 OBP2AQ9NY56 170 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 UNC119BA6NIH7 251 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 CYR61O00622 381 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 UGT2B7P16662 529 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 GDI1P31150 447 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 USP53Q70EK8 1073 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 COMMD7Q86VX2 200 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 OR4K14Q8NGD5 310 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 AP3S1Q92572 193 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 GCDHQ92947 438 aaPredicted RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 BMFQ96LC9 184 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 OR2M4Q96R27 311 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 MARVELD1Q9BSK0 173 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 SFXN1Q9H9B4 322 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 CACYBPQ9HB71 228 aaKnown RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 USP36Q9P275 1121 aaKnown RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 PRKAG2Q9UGJ0 569 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 C19orf53Q9UNZ5 99 aaPredicted RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 A0A087WV48 116 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3DA0A087WVF3 549 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3IA0A087WXS9 549 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3EA0A087X179 549 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3KA0A087X1G2 549 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 A0A0B4J203 849 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 IRGMA1A4Y4 181 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3FA6NER0 549 aaPredicted RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3LB9A6J9 549 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 HRKO00198 91 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 HCN1O60741 890 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 IGKV1D-16P01601 117 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3HP0C7X1 549 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 NID1P14543 1247 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 PRKACAP17612 351 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 PBX2P40425 430 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 CLDN20P56880 219 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 RPS15AP62244 130 aaKnown RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 FOXK2Q01167 660 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 PRICKLE4Q2TBC4 344 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 ZNF776Q68DI1 518 aaPredicted RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3GQ6DHY5 549 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3CQ6IPX1 549 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 MEPCEQ7L2J0 689 aaKnown RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 SERPINA12Q8IW75 414 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TBC1D3Q8IZP1 549 aaPredicted RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 ARL14Q8N4G2 192 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 OR4N2Q8NGD1 307 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 OR51L1Q8NGJ5 315 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 OR5J2Q8NH18 312 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TMEM239Q8WW34 195 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 FAM3CQ92520 227 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 AHCYL2Q96HN2 611 aaKnown RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 ABHD1Q96SE0 405 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 STARD5Q9NSY2 213 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 ACOXLQ9NUZ1 547 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 BABAM2Q9NXR7 383 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 CALML5Q9NZT1 146 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 GTF2A1LQ9UNN4 478 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 YBX2Q9Y2T7 364 aaKnown RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 HEATR5AQ86XA9 2040 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 FOXS1O43638 330 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 PTP4A3O75365 173 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 ARSBP15848 533 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 HLA-DMAP28067 261 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 CCR6P51684 374 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 OR12D2P58182 307 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 GPR18Q14330 331 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 ODF4Q2M2E3 257 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TOR2AQ5JU69 321 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 C9orf50Q5SZB4 431 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 KANSL1Q7Z3B3 1105 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 UBE2Q1Q7Z7E8 422 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 GJD3Q8N144 294 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 SRFBP1Q8NEF9 429 aaKnown RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 OR4D9Q8NGE8 314 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 OR2T35Q8NGX2 323 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 PHOSPHO2Q8TCD6 241 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 NR4A3Q92570 626 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TEAD3Q99594 435 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 PIGUQ9H490 435 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 WSB2Q9NYS7 404 aaPredicted RBP9.34□□□□□ -0.91
COPB1-201ENST00000249923 NLGN3Q9NZ94 848 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 DTX4Q9Y2E6 619 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 PCDHGB7Q9Y5F8 929 aa9.34□□□□□ -0.91
COPB1-201ENST00000249923 TRAPPC13A5PLN9 417 aa9.33□□□□□ -0.92
COPB1-201ENST00000249923 TGFBR3LH3BV60 316 aa9.33□□□□□ -0.92
COPB1-201ENST00000249923 SGK494L7N484 410 aa9.33□□□□□ -0.92
COPB1-201ENST00000249923 SIGLEC5O15389 551 aa9.33□□□□□ -0.92
COPB1-201ENST00000249923 TNFSF14O43557 240 aa9.33□□□□□ -0.92
COPB1-201ENST00000249923 ATP1B1P05026 303 aa9.33□□□□□ -0.92
COPB1-201ENST00000249923 THBS1P07996 1170 aa9.33□□□□□ -0.92
COPB1-201ENST00000249923 POLR2CP19387 275 aaPredicted RBP9.33□□□□□ -0.92
COPB1-201ENST00000249923 SIGLEC14Q08ET2 396 aa9.33□□□□□ -0.92
COPB1-201ENST00000249923 CLPPQ16740 277 aaPredicted RBP9.33□□□□□ -0.92
COPB1-201ENST00000249923 GARNL3Q5VVW2 1013 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms