RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SYT5O00445 386 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 PLSCR1O15162 318 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 C6P13671 934 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 APEX1P27695 318 aaKnown RBP7.71□□□□□ -1.17
APOB-201ENST00000233242 SPINT3P49223 89 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 PDE7AQ13946 482 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 EIF2B1Q14232 305 aaKnown RBP7.71□□□□□ -1.17
APOB-201ENST00000233242 OR52H1Q8NGJ2 320 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 NANPQ8TBE9 248 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 DDIT4LQ96D03 193 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 FBXL12Q9NXK8 326 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 PRELID3BQ9Y3B1 194 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 MTMR11A4FU01 709 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 LEFTY1O75610 366 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 CD1EP15812 388 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 CD53P19397 219 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 SERTAD2Q14140 314 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 TXNDC8Q6A555 127 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 OR5L2Q8NGL0 311 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 SYT17Q9BSW7 474 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 OR52D1Q9H346 318 aa7.71□□□□□ -1.17
APOB-201ENST00000233242 TESQ9UGI8 421 aaKnown RBP7.71□□□□□ -1.17
APOB-201ENST00000233242 FLT3LGP49771 235 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 SIRPAP78324 504 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 GKN2Q86XP6 184 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 UEVLDQ8IX04 471 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 TOMM40LQ969M1 308 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 CRB3Q9BUF7 120 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 RRAGCQ9HB90 399 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 PLAGL1Q9UM63 463 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 FOXE1O00358 373 aaPredicted RBP7.71□□□□□ -1.18
APOB-201ENST00000233242 SYNGR4O95473 234 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 CLPPQ16740 277 aaPredicted RBP7.71□□□□□ -1.18
APOB-201ENST00000233242 YIF1BQ5BJH7 314 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 FOXB2Q5VYV0 432 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 NDRG2Q9UN36 371 aaKnown RBP7.71□□□□□ -1.18
APOB-201ENST00000233242 RIMBP3CA6NJZ7 1639 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 RIMBP3BA6NNM3 1639 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 RIMBP3Q9UFD9 1639 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 MDFIC2A0A1B0GVS7 189 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 OR9A4Q8NGU2 314 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 TANKQ92844 425 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 RAB3CQ96E17 227 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 TRABD2BA6NFA1 517 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 RPS21P63220 83 aaKnown RBP7.71□□□□□ -1.18
APOB-201ENST00000233242 SLC14A1Q13336 389 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 INAVAQ3KP66 663 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 ZMAT1Q5H9K5 638 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 SIGIRRQ6IA17 410 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 UQCC3Q6UW78 93 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.181e-8■■□□□ 13.2
APOB-201ENST00000233242 OR10A5Q9H207 317 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 OR10A2Q9H208 303 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 CWH43Q9H720 699 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 NDUFB11Q9NX14 153 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 PURGQ9UJV8 347 aaKnown RBP7.71□□□□□ -1.18
APOB-201ENST00000233242 CCDC88CQ9P219 2028 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 CLEC3AO75596 197 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 GJA5P36382 358 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 TNK1Q13470 666 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 PELI3Q8N2H9 469 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 KDM8Q8N371 416 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 ZNF680Q8NEM1 530 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 CYB5D2Q8WUJ1 264 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 SGK3Q96BR1 496 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 RNF170Q96K19 258 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 ZNF681Q96N22 645 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 ASIC5Q9NY37 505 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 UBR1Q8IWV7 1749 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 GJE1A6NN92 205 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 CDC123O75794 336 aaPredicted RBP7.71□□□□□ -1.18
APOB-201ENST00000233242 WASP42768 502 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 RANP62826 216 aaKnown RBP7.71□□□□□ -1.18
APOB-201ENST00000233242 S100A7AQ86SG5 101 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 C11orf84Q9BUA3 381 aaPredicted RBP7.71□□□□□ -1.18
APOB-201ENST00000233242 DCDC2BA2VCK2 349 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 GZMKP49863 264 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 FAM189BP81408 668 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 P2RY14Q15391 338 aa7.71□□□□□ -1.18
APOB-201ENST00000233242 FCRLAQ7L513 359 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 DPPA2Q7Z7J5 298 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 MITD1Q8WV92 249 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 ISYNA1Q9NPH2 558 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 AKAP12Q02952 1782 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 UNCXA6NJT0 531 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 RHOP08100 348 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 LAP3P28838 519 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 LIPAP38571 399 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 KIAA0141Q14154 515 aaPredicted RBP7.7□□□□□ -1.18
APOB-201ENST00000233242 NKAIN3Q8N8D7 197 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 OR10Z1Q8NGY1 313 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 IGSF8Q969P0 613 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 FYTTD1Q96QD9 318 aaKnown RBP7.7□□□□□ -1.18
APOB-201ENST00000233242 HCAR1Q9BXC0 346 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 ADAM29Q9UKF5 820 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 PARP4Q9UKK3 1724 aaKnown RBP7.7□□□□□ -1.18
APOB-201ENST00000233242 FBXO24O75426 580 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 ISL1P61371 349 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 ACSM1Q08AH1 577 aa7.7□□□□□ -1.18
APOB-201ENST00000233242 NXNL2Q5VZ03 156 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms