RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 AKAP7Q9P0M2 348 aaPredicted RBP16.39■□□□□ 0.21
CDKN1B-201ENST00000228872 HCFC2Q9Y5Z7 792 aa16.39■□□□□ 0.21
CDKN1B-201ENST00000228872 CDH23Q9H251 3354 aa16.39■□□□□ 0.21
CDKN1B-201ENST00000228872 FXYD6-FXYD2A0A087WZ82 144 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 A0A0G2JPF8 293 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 HNRNPCL3B7ZW38 293 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 SYT5O00445 386 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 STX11O75558 287 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 HNRNPCL4P0DMR1 293 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 PRKAG1P54619 331 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 NRG3P56975 720 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 ZNF311Q5JNZ3 666 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 DMKNQ6E0U4 476 aaPredicted RBP16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 ZNF671Q8TAW3 534 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 GHSRQ92847 366 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 PNPLA2Q96AD5 504 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 ZNF707Q96C28 371 aaPredicted RBP16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 OR1F2PQ96R84 312 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 CPEB1Q9BZB8 566 aaKnown RBP16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 FXYD6Q9H0Q3 95 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 INPP5EQ9NRR6 644 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 SNRPGP15A8MWD9 76 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 CDC42EP2O14613 210 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 IL5P05113 134 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 AP3S2P59780 193 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 S100A12P80511 92 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 FGL1Q08830 312 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 LINC00303Q3SY05 128 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 LSRQ86X29 649 aaPredicted RBP16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 VRK2Q86Y07 508 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 CHST14Q8NCH0 376 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 FERD3LQ96RJ6 166 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 SLC13A4Q9UKG4 626 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 PCDHGA5Q9Y5G8 931 aa16.38■□□□□ 0.21
CDKN1B-201ENST00000228872 LINC01387J3KSC0 135 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 TMPRSS11DO60235 418 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 MRPL3P09001 348 aaKnown RBP16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 PTNP21246 168 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 PTGER1P34995 402 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 OR12D2P58182 307 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 MAT1AQ00266 395 aaKnown RBP16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 LRRTM4Q86VH4 590 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 FAM129CQ86XR2 697 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 TMEM255BQ8WV15 326 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 NKX6-2Q9C056 277 aaPredicted RBP16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 OPN4Q9UHM6 478 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 KCNK7Q9Y2U2 307 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 SLC6A5Q9Y345 797 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 CDHR4A6H8M9 788 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 ZNF749O43361 778 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 KHDRBS3O75525 346 aaKnown RBP16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 KRT33AO76009 404 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 THY1P04216 161 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 ZGLP1P0C6A0 271 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 MAT2AP31153 395 aaKnown RBP16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 GPR85P60893 370 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 MLC1Q15049 377 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 OLFML2AQ68BL7 652 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 MBOAT2Q6ZWT7 520 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 OR5J2Q8NH18 312 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 AMDHD1Q96NU7 426 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 UTP23Q9BRU9 249 aaKnown RBP16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 ACTR10Q9NZ32 417 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 AK6Q9Y3D8 172 aaKnown RBP16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 KCNE3Q9Y6H6 103 aa16.37■□□□□ 0.21
CDKN1B-201ENST00000228872 GABARAPH6UMI1 98 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 AQP8O94778 261 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 POP4O95707 220 aaKnown RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 IGF2P01344 180 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 PBX2P40425 430 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 ZNF85Q03923 595 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 SCRN3Q0VDG4 424 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 TMEM115Q12893 351 aaPredicted RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 LASP1Q14847 261 aaKnown RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 PRAMEF14Q5SWL7 426 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 C6orf132Q5T0Z8 1188 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 PRPF38BQ5VTL8 546 aaKnown RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 PRAMEF13Q5VWM6 474 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 FAAP20Q6NZ36 180 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 GRASPQ7Z6J2 395 aaPredicted RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 C2orf73Q8N5S3 287 aaPredicted RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 IL17FQ96PD4 163 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 MS4A8Q9BY19 250 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 ZCCHC2Q9C0B9 1178 aaKnown RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 LHX9Q9NQ69 397 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 KLHL9Q9P2J3 617 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 KLK11Q9UBX7 282 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 C2orf16Q68DN1 1984 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 CXorf51AA0A1B0GTR3 108 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 HDDC3Q8N4P3 179 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 PXT1Q8NFP0 134 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 OR52B4Q8NGK2 314 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 BRIX1Q8TDN6 353 aaKnown RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 GLYATL1Q969I3 302 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 ZG16BQ96DA0 208 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 PBX4Q9BYU1 374 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 POLMQ9NP87 494 aaPredicted RBP16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 FANCFQ9NPI8 374 aa16.36■□□□□ 0.21
CDKN1B-201ENST00000228872 SLC35C2Q9NQQ7 365 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms