RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CPLX4Q7Z7G2 160 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 MTDHQ86UE4 582 aaKnown RBP11.37□□□□□ -0.59
LSM5-201ENST00000223084 COMTD1Q86VU5 262 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 OR10A6Q8NH74 314 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 TMEM234Q8WY98 164 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 ROBO4Q8WZ75 1007 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 RCN3Q96D15 328 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 DNAJA3Q96EY1 480 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 CCDC106Q9BWC9 280 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 SPATA9Q9BWV2 254 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 PRRG4Q9BZD6 226 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 COQ10BQ9H8M1 238 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 CACYBPQ9HB71 228 aaKnown RBP11.37□□□□□ -0.59
LSM5-201ENST00000223084 MRGBPQ9NV56 204 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 CLEC4AQ9UMR7 237 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 ZNF232Q9UNY5 417 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 IFT52Q9Y366 437 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 ZNF175Q9Y473 711 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 NBPF19A0A087WUL8 3843 aa11.37□□□□□ -0.59
LSM5-201ENST00000223084 BBIP1A8MTZ0 92 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 EEF1E1-BLOC1S5C9J1V9 151 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 EEF1E1O43324 174 aaKnown RBP11.36□□□□□ -0.59
LSM5-201ENST00000223084 SNX3O60493 162 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 TPST1O60507 370 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 CCDC22O60826 627 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 TNFSF13O75888 250 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 SYNGR4O95473 234 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 IL18BPO95998 194 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 COX6B1P14854 86 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 ETS2P15036 469 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 GZMMP51124 257 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 DLX5P56178 289 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 GLIPR1L2Q4G1C9 344 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 COQ5Q5HYK3 327 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 RNF220Q5VTB9 566 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 C3orf33Q6P1S2 294 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 VWA1Q6PCB0 445 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 MEX3BQ6ZN04 569 aaKnown RBP11.36□□□□□ -0.59
LSM5-201ENST00000223084 GRINAQ7Z429 371 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 SERPINA11Q86U17 422 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 ADGRG3Q86Y34 549 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 TREML1Q86YW5 311 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 ZZZ3Q8IYH5 903 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 ZNF440Q8IYI8 595 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 CNEP1R1Q8N9A8 125 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 HIPK4Q8NE63 616 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 ZFP3Q96NJ6 502 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 OR5B2Q96R09 309 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 SFXN3Q9BWM7 321 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 NSRP1Q9H0G5 558 aaKnown RBP11.36□□□□□ -0.59
LSM5-201ENST00000223084 KAT8Q9H7Z6 458 aaKnown RBP11.36□□□□□ -0.59
LSM5-201ENST00000223084 RNF122Q9H9V4 155 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 SERINC1Q9NRX5 453 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
LSM5-201ENST00000223084 CELSR2Q9HCU4 2923 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 TMEM72A0PK05 275 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 GJE1A6NN92 205 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 SLC22A2O15244 555 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 HNRNPRO43390 633 aaKnown RBP11.35□□□□□ -0.59
LSM5-201ENST00000223084 GCM2O75603 506 aaPredicted RBP11.35□□□□□ -0.59
LSM5-201ENST00000223084 TFPIP10646 304 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 COX4I1P13073 169 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 PRF1P14222 555 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 KLK2P20151 261 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 TACR3P29371 465 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 SLC7A1P30825 629 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 UQCRC1P31930 480 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 APOBEC1P41238 236 aaKnown RBP11.35□□□□□ -0.59
LSM5-201ENST00000223084 KIR2DL2P43627 348 aaPredicted RBP11.35□□□□□ -0.59
LSM5-201ENST00000223084 ASCL1P50553 236 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 OR2A2Q6IF42 318 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 NET1Q7Z628 596 aaPredicted RBP11.35□□□□□ -0.59
LSM5-201ENST00000223084 BTLAQ7Z6A9 289 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 LUZP2Q86TE4 346 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 KRT73Q86Y46 540 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 CADM2Q8N3J6 435 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 ACBD4Q8NC06 268 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 C11orf65Q8NCR3 313 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 RP9Q8TA86 221 aaKnown RBP11.35□□□□□ -0.59
LSM5-201ENST00000223084 STARD4Q96DR4 205 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 OR11A1Q9GZK7 315 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 ENKD1Q9H0I2 346 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 PAQR5Q9NXK6 330 aaPredicted RBP11.35□□□□□ -0.59
LSM5-201ENST00000223084 CHRNA9Q9UGM1 479 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 OSGIN1Q9UJX0 560 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 MCTS1Q9ULC4 181 aaKnown RBP11.35□□□□□ -0.59
LSM5-201ENST00000223084 USP22Q9UPT9 525 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 ANGPT4Q9Y264 503 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 TMED7Q9Y3B3 224 aa11.35□□□□□ -0.59
LSM5-201ENST00000223084 IGHV3-15A0A0B4J1V0 119 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 SYT5O00445 386 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 FAAHO00519 579 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 AIM2O14862 343 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 SMNDC1O75940 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
LSM5-201ENST00000223084 OPN1SWP03999 348 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 FCGR2AP12318 317 aa11.34□□□□□ -0.59
LSM5-201ENST00000223084 IGFBP2P18065 325 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms