RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 EVA1BQ9NVM1 165 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 ST6GALNAC2Q9UJ37 374 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 TRABD2BA6NFA1 517 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 STX11O75558 287 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 MPC2O95563 127 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 EML2O95834 649 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 AGR2O95994 175 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 NID1P14543 1247 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 ZNF3P17036 446 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 SLC2A5P22732 501 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 MMP15P51511 669 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 AP2S1P53680 142 aaPredicted RBP17.1■□□□□ 0.33
CACTIN-201ENST00000221899 CRYZQ08257 329 aaKnown RBP17.1■□□□□ 0.33
CACTIN-201ENST00000221899 EXOSC2Q13868 293 aaKnown RBP17.1■□□□□ 0.33
CACTIN-201ENST00000221899 TRAM1Q15629 374 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 AMZ1Q400G9 498 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 PTCHD1Q96NR3 888 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 TIMM29Q9BSF4 260 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 MRPL39Q9NYK5 338 aaKnown RBP17.1■□□□□ 0.33
CACTIN-201ENST00000221899 WSB2Q9NYS7 404 aaPredicted RBP17.1■□□□□ 0.33
CACTIN-201ENST00000221899 SPEF1Q9Y4P9 236 aa17.1■□□□□ 0.33
CACTIN-201ENST00000221899 LINC00862A6NCI5 91 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 TIMP1P01033 207 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 TFP02787 698 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 TSFMP43897 325 aaKnown RBP17.09■□□□□ 0.33
CACTIN-201ENST00000221899 GDI2P50395 445 aaKnown RBP17.09■□□□□ 0.33
CACTIN-201ENST00000221899 CAMK2DQ13557 499 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 VITQ6UXI7 678 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 ZAR1Q86SH2 424 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 RNF113BQ8IZP6 322 aaKnown RBP17.09■□□□□ 0.33
CACTIN-201ENST00000221899 SDR9C7Q8NEX9 313 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 LRRC20Q8TCA0 184 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 LGALS14Q8TCE9 139 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 DERL3Q96Q80 235 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 PDCD1LG2Q9BQ51 273 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 CFHR5Q9BXR6 569 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 KCMF1Q9P0J7 381 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 FLRT2O43155 660 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 PDGFAP04085 211 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 DBIP07108 87 aaKnown RBP17.09■□□□□ 0.33
CACTIN-201ENST00000221899 THBS1P07996 1170 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 HNRNPA1P09651 372 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACTIN-201ENST00000221899 PSMB10P40306 273 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 SELENOPP49908 381 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 SNTA1Q13424 505 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 SUZ12Q15022 739 aaKnown RBP17.09■□□□□ 0.33
CACTIN-201ENST00000221899 PAQR7Q86WK9 346 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 ZNF527Q8NB42 609 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 OR4K13Q8NH42 304 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 RPLP0P6Q8NHW5 317 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 IL21RQ9HBE5 538 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 DLL4Q9NR61 685 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 NPFFR2Q9Y5X5 522 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 DENND4AQ7Z401 1863 aa17.09■□□□□ 0.33
CACTIN-201ENST00000221899 GXYLT2A0PJZ3 443 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 CPMP14384 443 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 CD53P19397 219 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 GDNFP39905 211 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 ZP1P60852 638 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 PLAURQ03405 335 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 SGCGQ13326 291 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 OR52E2Q8NGJ4 325 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 SORCS2Q96PQ0 1159 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 TMEM168Q9H0V1 697 aa17.08■□□□□ 0.33
CACTIN-201ENST00000221899 TBC1D3EA0A087X179 549 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 SHOXO15266 292 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 CFDP00746 253 aaPredicted RBP17.08■□□□□ 0.32
CACTIN-201ENST00000221899 HTRA4P83105 476 aaPredicted RBP17.08■□□□□ 0.32
CACTIN-201ENST00000221899 PITPNAQ00169 270 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 TMPRSS11FQ6ZWK6 438 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 LINGO2Q7L985 606 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 FAM98AQ8NCA5 519 aaKnown RBP17.08■□□□□ 0.32
CACTIN-201ENST00000221899 OR2T35Q8NGX2 323 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 HMGB4Q8WW32 186 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 PELI1Q96FA3 418 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 SARGQ9BW04 601 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 CHIAQ9BZP6 476 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 METTL17Q9H7H0 456 aaPredicted RBP17.08■□□□□ 0.32
CACTIN-201ENST00000221899 OR6C2Q9NZP2 312 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 NTMQ9P121 344 aa17.08■□□□□ 0.32
CACTIN-201ENST00000221899 THAP10Q9P2Z0 257 aaPredicted RBP17.08■□□□□ 0.32
CACTIN-201ENST00000221899 MEIKINA0A087WXM9 373 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 GMDSO60547 372 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 SULT1A3P0DMM9 295 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 SULT1A4P0DMN0 295 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 NT5EP21589 574 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 AK4P27144 223 aaPredicted RBP17.07■□□□□ 0.32
CACTIN-201ENST00000221899 MAGEB1P43366 347 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 RPL6Q02878 288 aaKnown RBP17.07■□□□□ 0.32
CACTIN-201ENST00000221899 KLF9Q13886 244 aaPredicted RBP17.07■□□□□ 0.32
CACTIN-201ENST00000221899 COL28A1Q2UY09 1125 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 TMEM255AQ5JRV8 349 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 HES5Q5TA89 166 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 HACD4Q5VWC8 232 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 BTN2A1Q7KYR7 527 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 PRSS41Q7RTY9 318 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 RD3Q7Z3Z2 195 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 COMMD7Q86VX2 200 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 SERPINA12Q8IW75 414 aa17.07■□□□□ 0.32
CACTIN-201ENST00000221899 MS4A15Q8N5U1 240 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms