RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 LCN10Q6JVE6 187 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 MEPCEQ7L2J0 689 aaKnown RBP17.56■□□□□ 0.4
MBD3-201ENST00000156825 SYNPRQ8TBG9 265 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 TM4SF18Q96CE8 201 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 FAIMQ9NVQ4 179 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 PLEKHJ1Q9NW61 149 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 ZNF337Q9Y3M9 751 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 AP1M2Q9Y6Q5 423 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 EPHA1P21709 976 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 TACR3P29371 465 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 CSNK1G2P78368 415 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 RPL19P84098 196 aaKnown RBP17.56■□□□□ 0.4
MBD3-201ENST00000156825 FGFBP1Q14512 234 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 PPA1Q15181 289 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 C3orf38Q5JPI3 329 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 BAIAP2L2Q6UXY1 529 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 ELOVL3Q9HB03 270 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 ZNF264O43296 627 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 IRF2P14316 349 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 IDUAP35475 653 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 CLDN12P56749 244 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 GGTA1PQ4G0N0 100 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 TMEM240Q5SV17 173 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 MMP21Q8N119 569 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 SLC16A11Q8NCK7 471 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 ASB16Q96NS5 453 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 ELF4Q99607 663 aaPredicted RBP17.56■□□□□ 0.4
MBD3-201ENST00000156825 EIF5A2Q9GZV4 153 aaKnown RBP17.56■□□□□ 0.4
MBD3-201ENST00000156825 UBQLN2Q9UHD9 624 aa17.56■□□□□ 0.4
MBD3-201ENST00000156825 A6NIZ1 184 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 APOC3P02656 99 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 HLA-DMAP28067 261 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 TPMTP51580 245 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 RAP1BP61224 184 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 RAP1AP62834 184 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 ZNF704Q6ZNC4 412 aaPredicted RBP17.55■□□□□ 0.4
MBD3-201ENST00000156825 BEST4Q8NFU0 473 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 TBCCD1Q9NVR7 557 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 BABAM2Q9NXR7 383 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 CEP290O15078 2479 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 GDPD1Q8N9F7 314 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 RRNAD1Q96FB5 475 aaKnown RBP17.55■□□□□ 0.4
MBD3-201ENST00000156825 ZNF845Q96IR2 970 aaPredicted RBP17.55■□□□□ 0.4
MBD3-201ENST00000156825 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
MBD3-201ENST00000156825 MEGF11A6BM72 1044 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 ACOD1A6NK06 481 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 ARPC5O15511 151 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 MTHFD2P13995 350 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 IFNGR1P15260 489 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 AGBL5Q8NDL9 886 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 MEPEQ9NQ76 525 aaPredicted RBP17.55■□□□□ 0.4
MBD3-201ENST00000156825 KCNIP1Q9NZI2 227 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 ASB1Q9Y576 335 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 IGHV3-20A0A0C4DH32 117 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 GPR157Q5UAW9 335 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 VN1R2Q8NFZ6 395 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 UBE2FQ969M7 185 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 MCTS1Q9ULC4 181 aaKnown RBP17.55■□□□□ 0.4
MBD3-201ENST00000156825 CEPT1Q9Y6K0 416 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 LOC102723532A0A0G2JNH3 316 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 A6NHS1 94 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 SLCO2B1O94956 709 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 ARSBP15848 533 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 MAKP20794 623 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 RAB38P57729 211 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 TMEM201Q5SNT2 666 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 GSG1LQ6UXU4 331 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 CD163Q86VB7 1156 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 OR5T1Q8NG75 326 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 ZNF417Q8TAU3 575 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 FOLH1BQ9HBA9 442 aa17.55■□□□□ 0.4
MBD3-201ENST00000156825 BTAF1O14981 1849 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 SCN9AQ15858 1988 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 ALS2Q96Q42 1657 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 TMEM72A0PK05 275 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 ARPC1BO15143 372 aaKnown RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 DCNP07585 359 aaKnown RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 RAB3AP20336 220 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 SEC61A1P61619 476 aaKnown RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 UNQ6126/PRO20091Q6UXV3 157 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 ADAMTSL4Q6UY14 1074 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 CYP4V2Q6ZWL3 525 aaPredicted RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 SLC37A2Q8TED4 501 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 AMDHD1Q96NU7 426 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 CDC6Q99741 560 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 OR10A5Q9H207 317 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 KIAA1211LQ6NV74 962 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 C6orf106Q9H6K1 298 aaPredicted RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 A0A1B0GVG6 124 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 SLC22A5O76082 557 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 CAMK2DQ13557 499 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 IL1F10Q8WWZ1 152 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 EDAQ92838 391 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 ULBP2Q9BZM5 246 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 GAREM1Q9H706 876 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 LSM5Q9Y4Y9 91 aaKnown RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 IFNA5P01569 189 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 ITGAMP11215 1152 aa17.54■□□□□ 0.4
MBD3-201ENST00000156825 HOXB9P17482 250 aaPredicted RBP17.54■□□□□ 0.4
MBD3-201ENST00000156825 APLNRP35414 380 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms