RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 OR10A4Q9H209 315 aa9.63□□□□□ -0.87
NIPAL3-201ENST00000003912 FAM53CQ9NYF3 392 aa9.63□□□□□ -0.87
NIPAL3-201ENST00000003912 COQ3Q9NZJ6 369 aa9.63□□□□□ -0.87
NIPAL3-201ENST00000003912 DNAJB11Q9UBS4 358 aa9.63□□□□□ -0.87
NIPAL3-201ENST00000003912 TMEM184BQ9Y519 407 aaPredicted RBP9.63□□□□□ -0.87
NIPAL3-201ENST00000003912 PIGBOS1A0A0B4J2F0 54 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 IGHV3-20A0A0C4DH32 117 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 TSPAN11A1L157 253 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 C4orf47A7E2U8 309 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 EIF4E2O60573 245 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 CSF2P04141 144 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 UGT2B10P36537 528 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SLC26A5P58743 744 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 HBMQ6B0K9 141 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 C22orf42Q6IC83 251 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SSX6Q7RTT6 188 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 MARVELD2Q8N4S9 558 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 MORN4Q8NDC4 146 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 GABRG3Q99928 467 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 MMP27Q9H306 513 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF69Q9UC07 566 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 POMT2Q9UKY4 750 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 PCDHB10Q9UN67 800 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 R4GN57 208 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ITGB2P05107 769 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 AMY2BP19961 511 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 RBMXP38159 391 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 CLDN17P56750 224 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 CNN3Q15417 329 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 TMEM244Q5VVB8 128 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 PRSS48Q7RTY5 328 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 INO80EQ8NBZ0 244 aaPredicted RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 PAPD5Q8NDF8 572 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 GPR148Q8TDV2 347 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ABHD5Q8WTS1 349 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 NPFFR2Q9Y5X5 522 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 A0A1W2PPC1 479 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 NUDT21O43809 227 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 PRH1P02810 166 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 PITPNBP48739 271 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 CDK10Q15131 360 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 PGGHGQ32M88 737 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 NIPAL3Q6P499 406 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 CPEB2Q7Z5Q1 589 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 FBXL6Q8N531 539 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 FRMD1Q8N878 549 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SLC25A43Q8WUT9 341 aaPredicted RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 C12orf43Q96C57 262 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SLC41A2Q96JW4 573 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 CHIAQ9BZP6 476 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ANKRD10Q9NXR5 420 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 NOP16Q9Y3C1 178 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 RGPD4Q7Z3J3 1758 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 IGHV1OR15-9A0A0B4J2B8 117 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SCGB1D2O95969 90 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 CHRM4P08173 479 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 NUDT7P0C024 238 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 MYF6P23409 242 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SOX3P41225 446 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 GFERP55789 205 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 FAM53BQ14153 422 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SLC6A19Q695T7 634 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 XKRXQ6PP77 449 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SIRT6Q8N6T7 355 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 TP53I13Q8NBR0 393 aaPredicted RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 NUDT22Q9BRQ3 303 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 WACQ9BTA9 647 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 FAM86C1Q9NVL1 165 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ITGB1BP2Q9UKP3 347 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ISPDA4D126 451 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF850A8MQ14 1090 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 GTF2F2P13984 249 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ZNF182P17025 639 aaPredicted RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 PIGFQ07326 219 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 ASB17Q8WXJ9 295 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 MRGPRX3Q96LB0 322 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 LIN28AQ9H9Z2 209 aaKnown RBP9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 DUSP22Q9NRW4 184 aa9.62□□□□□ -0.87
NIPAL3-201ENST00000003912 SHANK3Q9BYB0 1731 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 TNS1Q9HBL0 1735 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 EEF1E1-BLOC1S5C9J1V9 151 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 UBFD1O14562 309 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 EEF1E1O43324 174 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 HTR3BO95264 441 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 B3GALT4O96024 378 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 RAB3AP20336 220 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 RAB3BP20337 219 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 GNRHRP30968 328 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ART1P52961 327 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 SIRPAP78324 504 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 TSPAN31Q12999 210 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 TP53I3Q53FA7 332 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ZFP41Q8N8Y5 198 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 TRMT10AQ8TBZ6 339 aaKnown RBP9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 ABRACLQ9P1F3 81 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 WDR37Q9Y2I8 494 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 MYO7AQ13402 2215 aa9.61□□□□□ -0.87
NIPAL3-201ENST00000003912 PRRG2O14669 202 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms