RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ces2cQ91WG0 561 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Rprd1bQ9CSU0 326 aaKnown RBP17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Sorcs2Q9EPR5 1159 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Deaf1Q9Z1T5 566 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 PcntP48725 2898 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Cer1O55233 272 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Il2raP01590 268 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 P03976 113 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Nkx3-2P97503 333 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 MakQ04859 622 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 March9Q3TZ87 348 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Crtc2Q3U182 692 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Fgl1Q71KU9 314 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 GatcQ8CBY0 155 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Rhbdl1Q8VC82 373 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Col26a1Q91VF6 440 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ubox5Q925F4 539 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Tktl1Q99MX0 595 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Herpud2Q9JJC9 404 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Cdc7Q9Z0H0 564 aa17.42■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Kif26bQ7TNC6 2112 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 MfngO09008 321 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Apoc3P33622 99 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 NcanP55066 1268 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Rras2P62071 204 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 4930480E11RikQ0VG34 394 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Treml4Q3LRV9 263 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Macrod2Q3UYG8 475 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Taf6Q62311 678 aaKnown RBP17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pum2Q80U58 1066 aaKnown RBP17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Kcmf1Q80UY2 381 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Rgp1Q8BHT7 391 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 MdficQ8BX65 247 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Cep68Q8C0D9 733 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 H1fntQ8CJI4 398 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 MepceQ8K3A9 666 aaKnown RBP17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Gipc3Q8R5M0 297 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Grk5Q8VEB1 590 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr54Q8VFE6 313 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr569Q8VGZ2 314 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Adarb1Q91ZS8 711 aaKnown RBP17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 3110001I22RikQ9CZ70 312 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Jph3Q9ET77 744 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Tmem37Q9JJV3 211 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Dennd4cA6H8H2 1906 aa17.41■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 A0A286YDM2 672 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Spata6lB2RV46 347 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Gm3755K7N743 167 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Prdx6O08709 224 aaKnown RBP17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 AurkcO88445 282 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr6P34986 316 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ptpn18Q61152 453 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Creg2Q8BGC9 288 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 A730049H05RikQ8C940 139 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Eipr1Q8K0G5 386 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Alkbh3Q8K1E6 286 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Kiaa0513Q8R0A7 407 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Imp3Q921Y2 184 aaKnown RBP17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 BollQ924M5 281 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 NtmQ99PJ0 344 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Prl8a1Q9DAV8 240 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Tmem43Q9DBS1 400 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Tor3aQ9ER38 385 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ccl27Q9Z1X0 120 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 LhcgrP30730 700 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Fam109bQ14B98 259 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Msto1Q2YDW2 556 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Xrcc1Q60596 631 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 HpQ61646 347 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Klk8Q61955 260 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Hs6st2Q80UW0 612 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Gpr68Q8BFQ3 365 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ap5m1Q8BJ63 490 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Faim2Q8K097 317 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Gpr18Q8K1Z6 331 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 AspaQ8R3P0 312 aa17.4■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pcdhgb8A0A140LI48 931 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 TomtA1Y9I9 258 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Olfr1206A2ATJ9 307 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Zfp282E9PVC2 666 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Chst3O88199 472 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Hoxb3P09026 433 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Nup43P59235 380 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Eif4eP63073 217 aaKnown RBP17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pydc3Q3V3Q4 588 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Fzd3Q61086 666 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ffar4Q7TMA4 361 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Efcab3Q80X60 432 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Pafah2Q8VDG7 390 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 1700029P11RikQ9CQ68 150 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Fank1Q9DAM9 344 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Ca7Q9ERQ8 264 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Bco1Q9JJS6 566 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Aldh9a1Q9JLJ2 494 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Orc5Q9WUV0 435 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Hey1Q9WV93 299 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Stk25Q9Z2W1 426 aa17.39■□□□□ 0.38
Shkbp1-201ENSMUST00000003857 Igkv15-103A0A140T8P3 115 aa17.39■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm7929A0A286YDV3 213 aa17.39■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm21977F6U3N7 213 aa17.39■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms