RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	MRPS7	Q9Y2R9	242 aa	Known RBP	12.8	□□□□□ -0.36
PHGDH-233	ENST00000642021	KIAA0100	Q14667	2235 aa	Known RBP	12.8	□□□□□ -0.36
PHGDH-233	ENST00000642021		A0A1W2PRG6	482 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	DCST2	Q5T1A1	773 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	GARNL3	Q5VVW2	1013 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	BICRAL	Q6AI39	1079 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	PRSS41	Q7RTY9	318 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	TMEM52	Q8NDY8	209 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	SP7	Q8TDD2	431 aa	Predicted RBP	12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	SMPDL3B	Q92485	455 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	PIGU	Q9H490	435 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	KLF15	Q9UIH9	416 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	PHF11	Q9UIL8	331 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	MRPS2	Q9Y399	296 aa	Known RBP	12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	VCAN	P13611	3396 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	LOC105369274	A0A096LPK9	316 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	SLC22A31	A6NKX4	558 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	SLC31A1	O15431	190 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	ADAM11	O75078	769 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	THBS1	P07996	1170 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	CPM	P14384	443 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	NID1	P14543	1247 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	SNRPB	P14678	240 aa	Known RBP	12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	MYOG	P15173	224 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	RPS4Y1	P22090	263 aa	Known RBP	12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	SLC2A5	P22732	501 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	DGCR2	P98153	550 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	FHL5	Q5TD97	284 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	ZNF767P	Q75MW2	155 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	RNF113B	Q8IZP6	322 aa	Known RBP	12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	OR4N4	Q8N0Y3	316 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	ZNF619	Q8N2I2	560 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	ZNF655	Q8N720	491 aa	Predicted RBP	12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	OR14C36	Q8NHC7	312 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	CCL4L1	Q8NHW4	92 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	GRHL3	Q8TE85	626 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	YIPF5	Q969M3	257 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	ZFP3	Q96NJ6	502 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	ORAI3	Q9BRQ5	295 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	SLC17A9	Q9BYT1	436 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	TEKT2	Q9UIF3	430 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	DAPP1	Q9UN19	280 aa		12.79	□□□□□ -0.36
PHGDH-233	ENST00000642021	C7orf66	A4D0T2	115 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	FAM86C2P	A6NEL3	165 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	MEN1	O00255	615 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	PTP4A3	O75365	173 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	PPP1R3D	O95685	299 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	AGR2	O95994	175 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	TCRB	P04435	133 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	LAMP2	P13473	410 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	ATF1	P18846	271 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	GIF	P27352	417 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	CCR6	P51684	374 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	EIPR1	Q53HC9	387 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	DMKN	Q6E0U4	476 aa	Predicted RBP	12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	TMPRSS11F	Q6ZWK6	438 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	SIAH3	Q8IW03	269 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	SLC44A3	Q8N4M1	653 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	OR2A5	Q96R48	311 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	TNFRSF13C	Q96RJ3	184 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	APOO	Q9BUR5	198 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	MKRN2	Q9H000	416 aa	Known RBP	12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	CACYBP	Q9HB71	228 aa	Known RBP	12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	IL21R	Q9HBE5	538 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	ZNF222	Q9UK12	451 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	C19orf53	Q9UNZ5	99 aa	Predicted RBP	12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	LINC01553	A4QN01	128 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	STX11	O75558	287 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	RCBTB2	O95199	551 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	ANKRD34C	P0C6C1	535 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	SMIM10L1	P0DMW3	83 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	FCAR	P24071	287 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	UQCRC1	P31930	480 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	RUNX3	Q13761	415 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	EXOSC7	Q15024	291 aa	Known RBP	12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	PYHIN1	Q6K0P9	492 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	USP53	Q70EK8	1073 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	TPRA1	Q86W33	373 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	SAMD14	Q8IZD0	417 aa	Predicted RBP	12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	OR8H1	Q8NGG4	311 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	OR51L1	Q8NGJ5	315 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	SMIM10	Q96HG1	83 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	MED30	Q96HR3	178 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	KIR3DX1	Q9H7L2	352 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	MGAT4A	Q9UM21	535 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	SLC35A3	Q9Y2D2	325 aa		12.78	□□□□□ -0.36
PHGDH-233	ENST00000642021	GXYLT2	A0PJZ3	443 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	LRRC72	A6NJI9	287 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	DHFR	P00374	187 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	DBI	P07108	87 aa	Known RBP	12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	RAB3B	P20337	219 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	C5AR1	P21730	350 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	BMP8B	P34820	402 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	RPS15A	P62244	130 aa	Known RBP	12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	RGS1	Q08116	209 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	FHL1	Q13642	323 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	TP53I3	Q53FA7	332 aa		12.77	□□□□□ -0.36
PHGDH-233	ENST00000642021	ZC3H14	Q6PJT7	736 aa	Known RBP	12.77	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms