RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KLHL28Q9NXS3 571 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 ALKBH4Q9NXW9 302 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 SLC13A4Q9UKG4 626 aa11.92□□□□□ -0.5
GTF3A-209ENST00000640289 SYT5O00445 386 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 FAAHO00519 579 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 PRRG2O14669 202 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 GYG2O15488 501 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 SEC14L5O43304 696 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 TPST2O60704 377 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 SERPINA1P01009 418 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 GP1BBP13224 206 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF708P17019 499 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 POU3F2P20265 443 aaPredicted RBP11.91□□□□□ -0.5
GTF3A-209ENST00000640289 HTR2AP28223 471 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 SHC1P29353 583 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 EIF1P41567 113 aaKnown RBP11.91□□□□□ -0.5
GTF3A-209ENST00000640289 SUCLG1P53597 346 aaKnown RBP11.91□□□□□ -0.5
GTF3A-209ENST00000640289 CLDN15P56746 228 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 CLDN18P56856 261 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 CLDN20P56880 219 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 RGS8P57771 180 aaPredicted RBP11.91□□□□□ -0.5
GTF3A-209ENST00000640289 MERTKQ12866 999 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 NPTX1Q15818 432 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 NRF1Q16656 503 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 ENPP6Q6UWR7 440 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 NCCRP1Q6ZVX7 275 aaPredicted RBP11.91□□□□□ -0.5
GTF3A-209ENST00000640289 PLEKHM3Q6ZWE6 761 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 RBM45Q8IUH3 476 aaKnown RBP11.91□□□□□ -0.5
GTF3A-209ENST00000640289 RPRMLQ8N4K4 120 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 ATP6V1C2Q8NEY4 427 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 TNIP2Q8NFZ5 429 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 RASSF5Q8WWW0 418 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 TMEM234Q8WY98 164 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 SLC35B4Q969S0 331 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 FAM162AQ96A26 154 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 TPD52L3Q96J77 140 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 MRGPRX4Q96LA9 322 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 PRDM14Q9GZV8 571 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 CTPS2Q9NRF8 586 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.91□□□□□ -0.5
GTF3A-209ENST00000640289 CAMK2AQ9UQM7 478 aa11.91□□□□□ -0.5
GTF3A-209ENST00000640289 KDM4EB2RXH2 506 aaPredicted RBP11.9□□□□□ -0.5
GTF3A-209ENST00000640289 LINC01387J3KSC0 135 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 ARPC2O15144 300 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 ZNF682O95780 498 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 IFNA14P01570 189 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 C8BP07358 591 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 STSP08842 583 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 UQCRBP14927 111 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 CCNA2P20248 432 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 ELK4P28324 431 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 ADH6P28332 368 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 TACR3P29371 465 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 SLC1A3P43003 542 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 CA7P43166 264 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 OR1E2P47887 323 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 DLX5P56178 289 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 COPZ1P61923 177 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 RAC1P63000 192 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 SELENOWP63302 87 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 FXNQ16595 210 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 WBP2NLQ6ICG8 309 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 PLXDC2Q6UX71 529 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 CBLL1Q75N03 491 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 GRINAQ7Z429 371 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 VTCN1Q7Z7D3 282 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 ULK2Q8IYT8 1036 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 OR6T1Q8NGN1 323 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 PROX1Q92786 737 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 BTBD10Q9BSF8 475 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 THTPAQ9BU02 230 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 OSGIN1Q9UJX0 560 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 BAG5Q9UL15 447 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
GTF3A-209ENST00000640289 SH3GLB1Q9Y371 365 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 AP4B1Q9Y6B7 739 aa11.9□□□□□ -0.5
GTF3A-209ENST00000640289 CFAP46Q8IYW2 2715 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 TMEM72A0PK05 275 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 H0Y3Z8 333 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 CPN1P15169 458 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 SFTPDP35247 375 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 APOBEC1P41238 236 aaKnown RBP11.89□□□□□ -0.51
GTF3A-209ENST00000640289 SELENBP1Q13228 472 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.89□□□□□ -0.512e-7■■■□□ 17.2
GTF3A-209ENST00000640289 SPATS1Q496A3 300 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 DNAL1Q4LDG9 190 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 RTL6Q6ICC9 239 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 GGNQ86UU5 652 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 FJX1Q86VR8 437 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 CARM1Q86X55 608 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 ADGRG3Q86Y34 549 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 PM20D2Q8IYS1 436 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 LILRA2Q8N149 483 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 ARHGAP24Q8N264 748 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 OR52E4Q8NGH9 312 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 HSH2DQ96JZ2 352 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 MCHR1Q99705 422 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 TUBA1CQ9BQE3 449 aa11.89□□□□□ -0.51
GTF3A-209ENST00000640289 ADAM19Q9H013 955 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms