RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PVRIGQ6DKI7 326 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 AFTPHQ6ULP2 937 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 CBLN3Q6UW01 205 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 RNF165Q6ZSG1 346 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 CYS1Q717R9 158 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 ZNF573Q86YE8 665 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 GIPC3Q8TF64 312 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 UPRTQ96BW1 309 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 TBCDQ9BTW9 1192 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 SLC25A51Q9H1U9 297 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 COQ10BQ9H8M1 238 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 CALHM2Q9HA72 323 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 POLD4Q9HCU8 107 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 C1orf123Q9NWV4 160 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 MFHAS1Q9Y4C4 1052 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 AP4B1Q9Y6B7 739 aa2.68□□□□□ -1.98
CCDC7-216ENST00000640058 LOC100131303A0A0U1RQF7 123 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 GJE1A6NN92 205 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 DLGAP1O14490 977 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 ANGPT2O15123 496 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 OPN1LWP04000 364 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 PCCAP05165 728 aaPredicted RBP2.67□□□□□ -1.98
CCDC7-216ENST00000640058 HEXBP07686 556 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 UQCRBP14927 111 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 ZNF823P16415 610 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 PAICSP22234 425 aaKnown RBP2.67□□□□□ -1.98
CCDC7-216ENST00000640058 EPHX2P34913 555 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 DLSTP36957 453 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 LHX2P50458 406 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 CCR6P51684 374 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 SUCLG1P53597 346 aaKnown RBP2.67□□□□□ -1.98
CCDC7-216ENST00000640058 POLR2FP61218 127 aaKnown RBP2.67□□□□□ -1.98
CCDC7-216ENST00000640058 HERVK_113P61574 105 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 TRIP10Q15642 601 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 TSPO2Q5TGU0 170 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 SCYL2Q6P3W7 929 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 ERASQ7Z444 233 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 ANKRD37Q7Z713 158 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 ZSCAN4Q8NAM6 433 aaPredicted RBP2.67□□□□□ -1.98
CCDC7-216ENST00000640058 NANPQ8TBE9 248 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 FAM151AQ8WW52 585 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 RSPH1Q8WYR4 309 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 OR1E3Q8WZA6 343 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 RPUSD4Q96CM3 377 aaKnown RBP2.67□□□□□ -1.98
CCDC7-216ENST00000640058 SLC30A2Q9BRI3 323 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 COMMD4Q9H0A8 199 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 DPH5Q9H2P9 285 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 WDR76Q9H967 626 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 SLC35D1Q9NTN3 355 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 CYTH4Q9UIA0 394 aa2.67□□□□□ -1.98
CCDC7-216ENST00000640058 PRPF19Q9UMS4 504 aaKnown RBP2.67□□□□□ -1.98
CCDC7-216ENST00000640058 IGLV4-69A0A075B6H9 119 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 ZNF705EA8MWA4 302 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 CTAGE5O15320 804 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 PTMAP06454 111 aaKnown RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 CALCBP10092 127 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 H2AFXP16104 143 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 DESP17661 470 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 XRCC1P18887 633 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 MAGP20916 626 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 MADCAM1Q13477 382 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 ATF7IP2Q5U623 682 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 LINC01551Q86U37 167 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 STKLD1Q8NE28 680 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 SYAP1Q96A49 352 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 THUMPD2Q9BTF0 503 aaKnown RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 ZNF416Q9BWM5 594 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 POLR2J2Q9GZM3 115 aaKnown RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 MAGT1Q9H0U3 335 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 POLR2J3Q9H1A7 115 aaKnown RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 POLR3FQ9H1D9 316 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 RWDD1Q9H446 243 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 SLCO1B1Q9Y6L6 691 aa2.66□□□□□ -1.98
CCDC7-216ENST00000640058 SF3B1O75533 1304 aaKnown RBP eCLIP2.66□□□□□ -1.98
CCDC7-216ENST00000640058 CARMIL1Q5VZK9 1371 aa2.65□□□□□ -1.98
CCDC7-216ENST00000640058 IGLV4-60A0A075B6I1 120 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 KRTAP4-16G5E9R7 235 aaPredicted RBP2.65□□□□□ -1.99
CCDC7-216ENST00000640058 CLDN5O00501 218 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 FCN1O00602 326 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 RIPK2O43353 540 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 DUX1O43812 170 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 MFN2O95140 757 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 ANXA3P12429 323 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 TNNI3P19429 210 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 NAPAP54920 295 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 CSNK1G2P78368 415 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 GGTLC2Q14390 218 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 HSP90AA5PQ58FG0 334 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 UNQ9370/PRO34162Q6UXP9 181 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 CENPUQ71F23 418 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 GRAMD2AQ8IUY3 354 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 CENPLQ8N0S6 344 aaPredicted RBP2.65□□□□□ -1.99
CCDC7-216ENST00000640058 DTNBP1Q96EV8 351 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 HPDLQ96IR7 371 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 RSPO3Q9BXY4 272 aaPredicted RBP2.65□□□□□ -1.99
CCDC7-216ENST00000640058 DCDC2Q9UHG0 476 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 TTC21BQ7Z4L5 1316 aa2.65□□□□□ -1.99
CCDC7-216ENST00000640058 PPIAL4CA0A0B4J2A2 164 aa2.64□□□□□ -1.99
CCDC7-216ENST00000640058 MAPK13O15264 365 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms