RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SLC35C2Q9NQQ7 365 aa9.5□□□□□ -0.89
PTP4A1-207ENST00000639568 NMRK1Q9NWW6 199 aa9.5□□□□□ -0.89
PTP4A1-207ENST00000639568 TXNDC16Q9P2K2 825 aa9.5□□□□□ -0.89
PTP4A1-207ENST00000639568 KLHL21Q9UJP4 597 aa9.5□□□□□ -0.89
PTP4A1-207ENST00000639568 DCTN4Q9UJW0 460 aa9.5□□□□□ -0.89
PTP4A1-207ENST00000639568 C19orf53Q9UNZ5 99 aaPredicted RBP9.5□□□□□ -0.89
PTP4A1-207ENST00000639568 IGKV3D-15A0A087WSY6 115 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 GXYLT2A0PJZ3 443 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 PIP5K1BO14986 540 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 SLITRK5O94991 958 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 IGKV1D-16P01601 117 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 HOXB1P14653 301 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 CSNK2A1P68400 391 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 GALNT1Q10472 559 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 SELENBP1Q13228 472 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 FRG1Q14331 258 aaKnown RBP9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 HEPACAMQ14CZ8 416 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 PDK3Q15120 406 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 VPS26BQ4G0F5 336 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 SLC9B1Q4ZJI4 515 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 CCDC137Q6PK04 289 aaKnown RBP9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 TMEM107Q6UX40 140 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 ISCA2Q86U28 154 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 RIBC1Q8N443 379 aaPredicted RBP9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 KIR3DL3Q8N743 410 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 PIK3R3Q92569 461 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 RAB39BQ96DA2 213 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 ARL5BQ96KC2 179 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 CDK15Q96Q40 435 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 CITED1Q99966 193 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 KLHDC3Q9BQ90 382 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 LMF2Q9BU23 707 aaKnown RBP9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 ZNF442Q9H7R0 627 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 ZNF665Q9H7R5 613 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 NMRAL1Q9HBL8 299 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 UBQLN4Q9NRR5 601 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 OXSMQ9NWU1 459 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 ICAM5Q9UMF0 924 aa9.49□□□□□ -0.89
PTP4A1-207ENST00000639568 GNG14A0A1W2PPG7 69 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 TTC36A6NLP5 189 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 CLDN34H7C241 214 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 SULT2B1O00204 365 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 UPK1AO00322 258 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 PRB2P02812 416 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 JUNP05412 331 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 IL3P08700 152 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 PAX7P23759 505 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 COL8A2P25067 703 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 THBS4P35443 961 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 DIO1P49895 249 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 CCNG1P51959 295 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 NCBP2P52298 156 aaKnown RBP eCLIP9.48□□□□□ -0.896e-21■□□□□ 9.5
PTP4A1-207ENST00000639568 NAAAQ02083 359 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 HIKESHIQ53FT3 197 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 ELFN2Q5R3F8 820 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 ZNF362Q5T0B9 420 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 STEAP4Q687X5 459 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 REP15Q6BDI9 236 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 ANKRD16Q6P6B7 361 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 CASP12Q6UXS9 341 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 SYT10Q6XYQ8 523 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 RAPH1Q70E73 1250 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 MTDHQ86UE4 582 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 CDK20Q8IZL9 346 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 C1orf52Q8N6N3 182 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 NUP37Q8NFH4 326 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 OR4F5Q8NH21 305 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 FAM110DQ8TAY7 271 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 MRAPQ8TCY5 172 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 ZHX1-C8orf76Q96EF9 292 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 C1orf147Q96MC9 270 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 ATOH8Q96SQ7 321 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 DESI2Q9BSY9 194 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 ZNF416Q9BWM5 594 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 RSPO3Q9BXY4 272 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 MS4A5Q9H3V2 200 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 NOL11Q9H8H0 719 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 OBP2BQ9NPH6 170 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 ZNF275Q9NSD4 429 aaPredicted RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 PARPBPQ9NWS1 579 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 NFU1Q9UMS0 254 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 TNPO3Q9Y5L0 923 aaKnown RBP9.48□□□□□ -0.89
PTP4A1-207ENST00000639568 SLC22A31A6NKX4 558 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 PDLIM1O00151 329 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 CRYBA1P05813 215 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 MPGP29372 298 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 CXCR5P32302 372 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 ALDH18A1P54886 795 aaKnown RBP9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 UBE2NP61088 152 aaKnown RBP9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 ZNF117Q03924 483 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 PPP1R7Q15435 360 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 SLC9A3R2Q15599 337 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 TRADDQ15628 312 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 FAM189A2Q15884 450 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 ARMCX4Q5H9R4 360 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 C3orf33Q6P1S2 294 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 C16orf87Q6PH81 154 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 RHOUQ7L0Q8 258 aa9.47□□□□□ -0.89
PTP4A1-207ENST00000639568 RELL1Q8IUW5 271 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms