RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 FTMTQ8N4E7 242 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 OR2S2Q9NQN1 319 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 C1GALT1Q9NS00 363 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 KLHL9Q9P2J3 617 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 MED16Q9Y2X0 877 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 MEMO1Q9Y316 297 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 A0A087WUU8 490 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 MEIS3P1A6NDR6 274 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 PRR35P0CG20 571 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 TEAD1P28347 426 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 TRIM23P36406 574 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 TRMT12Q53H54 448 aaKnown RBP13.44□□□□□ -0.26
SCARB2-216ENST00000639300 SPIN3Q5JUX0 258 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 OR13C3Q8NGS6 347 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 PGAM5Q96HS1 289 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 KATNB1Q9BVA0 655 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF701Q9NV72 531 aaPredicted RBP13.44□□□□□ -0.26
SCARB2-216ENST00000639300 OR51B4Q9Y5P0 310 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 ARFGEF1Q9Y6D6 1849 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 FCMRO60667 390 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 SLC16A7O60669 478 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 SCG5P05408 212 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 PNMTP11086 282 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 SHC1P29353 583 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 CASRP41180 1078 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 TATDN3Q17R31 274 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 RNASE10Q5GAN6 216 aaKnown RBP13.44□□□□□ -0.26
SCARB2-216ENST00000639300 TCTN3Q6NUS6 607 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 PAQR6Q6TCH4 344 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 OR5L2Q8NGL0 311 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 DEDD2Q8WXF8 326 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 POT1Q9NUX5 634 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 MGAT4AQ9UM21 535 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 JMJD7P0C870 316 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 GIFP27352 417 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 CD38P28907 300 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 CTHP32929 405 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 NKPD1Q17RQ9 610 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 CCDC58Q4VC31 144 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 PRAMEF8Q5VWM4 474 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 PRAMEF7Q5VXH5 474 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 MFSD12Q6NUT3 480 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 GPR148Q8TDV2 347 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 MS4A6EQ96DS6 147 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 CRB3Q9BUF7 120 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 SGPP1Q9BX95 441 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 ATP13A2Q9NQ11 1180 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 HPF1Q9NWY4 346 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 LRIT1Q9P2V4 623 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 RPH3AQ9Y2J0 694 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-216ENST00000639300 PCM1Q15154 2024 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 COL5A3P25940 1745 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-216ENST00000639300 SHANK3Q9BYB0 1731 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 A0A1B0GWA3 101 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 ACOD1A6NK06 481 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 CSO75390 466 aaKnown RBP13.43□□□□□ -0.26
SCARB2-216ENST00000639300 OR8G3PP0DMU2 310 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 SLC19A1P41440 591 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 CLDN12P56749 244 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 KCNJ8Q15842 424 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 RAB11BQ15907 218 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 SLC22A10Q63ZE4 541 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 RAB12Q6IQ22 244 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 ACSM5Q6NUN0 579 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 LRRC56Q8IYG6 542 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-216ENST00000639300 CELF2-AS1Q8N7Q2 184 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 OR5T2Q8NGG2 359 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 HYLS1Q96M11 299 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 UBQLN3Q9H347 655 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 UBQLN4Q9NRR5 601 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 ASXL3Q9C0F0 2248 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 H7C1C5 153 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 AMY2AP04746 511 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 HOXC12P31275 282 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 LCN6P62502 163 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 FAM189A2Q15884 450 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 PLK5Q496M5 336 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 EEF1A1P5Q5VTE0 462 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 GDF7Q7Z4P5 450 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 OR52I1Q8NGK6 324 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 CCL4L1Q8NHW4 92 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 MSANTD3Q96H12 275 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 MCCC2Q9HCC0 563 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 C2orf42Q9NWW7 574 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 DHCR7Q9UBM7 475 aaKnown RBP13.43□□□□□ -0.26
SCARB2-216ENST00000639300 NTNG1Q9Y2I2 539 aa13.43□□□□□ -0.26
SCARB2-216ENST00000639300 DOCK1Q14185 1865 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 METTL15A6NJ78 407 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 F5H0A9 414 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 HMGN4O00479 90 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 PRSS3P35030 304 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 RPS19P39019 145 aaKnown RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 CSNK1EP49674 416 aaKnown RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 EPHA5P54756 1037 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 IHHQ14623 411 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 PYCR3Q53H96 274 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 CCSAPQ6IQ19 270 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-216ENST00000639300 LAS2Q8IYD9 372 aa13.42□□□□□ -0.26
SCARB2-216ENST00000639300 GALNT11Q8NCW6 608 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms