RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 PRELID3BQ9Y3B1 194 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 WDR45Q9Y484 360 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 NUBP2Q9Y5Y2 271 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 USH1CQ9Y6N9 552 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 MSH6P52701 1360 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 ZMYM3Q14202 1370 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 KIAA0232Q92628 1395 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 JCADQ9P266 1359 aa2.74□□□□□ -1.97
VIM-210ENST00000637053 PNPLA7Q6ZV29 1317 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ERCC6Q03468 1493 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PQLC2LA1A4F0 135 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 OR6C68A6NDL8 312 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ANKUB1A6NFN9 424 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 METTL15A6NJ78 407 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 VSTM2BA6NLU5 285 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 C9J4A7 227 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PRSS46E5RG02 174 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 H3BNH8 94 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 M0QZ24 198 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 TXNDC9O14530 226 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PFDN6O15212 129 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SLC22A1O15245 554 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SLC16A4O15374 487 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RNMTO43148 476 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 TGOLN2O43493 480 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 KIAA0513O60268 411 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 UGT1A9O60656 530 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 AGFG2O95081 481 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RCBTB2O95199 551 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PAPSS2O95340 614 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 TNFAIP8O95379 198 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 BAG3O95817 575 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ANGPTL1O95841 491 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MOCS2O96007 188 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 EGFP01133 1207 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 GAPDHP04406 335 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 JUNP05412 331 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 CD5P06127 495 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 LCKP06239 509 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 GSTA1P08263 222 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 TMEM225BP0DP42 221 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PRF1P14222 555 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 KCNE1P15382 129 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 NQO1P15559 274 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 F8A1P23610 371 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 DCKP27707 260 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 NMBRP28336 390 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SSTR2P30874 369 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ARRB2P32121 409 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 CYLC1P35663 651 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 HSD17B3P37058 310 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 TALDO1P37837 337 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MAGEA12P43365 314 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 GABRA4P48169 554 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SOX2P48431 317 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SRP9P49458 86 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 MEOX2P50222 304 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RAB13P51153 203 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 XKP51811 444 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 DGKQP52824 942 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 NUDT6P53370 316 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ATP1B3P54709 279 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RAG2P55895 527 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 LOXL3P58215 753 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 UBE2KP61086 200 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RAP2BP61225 183 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RPS7P62081 194 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 CFHR1Q03591 330 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RELAQ04206 551 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SRSF6Q13247 344 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 KRR1Q13601 381 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 RAB31Q13636 194 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 EXOSC2Q13868 293 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 TFDP1Q14186 410 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 GANABQ14697 944 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 PTGR1Q14914 329 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 NDUFA9Q16795 377 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MEP1AQ16819 746 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 GCSAMLQ5JQS6 135 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SAMD4BQ5PRF9 694 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 C6orf141Q5SZD1 244 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 OTUD3Q5T2D3 398 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 IDNKQ5T6J7 187 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 CD276Q5ZPR3 534 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 TRIQKQ629K1 86 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ELP2Q6IA86 826 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 GRHL2Q6ISB3 625 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 LRRC8EQ6NSJ5 796 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 FAHD2BQ6P2I3 314 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 ANKRD16Q6P6B7 361 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 EMBQ6PCB8 327 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 DNM1P34Q6PK57 102 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 LCTLQ6UWM7 567 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RBMS3Q6XE24 437 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 CYHR1Q6ZMK1 362 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ZNF841Q6ZN19 808 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ZNF621Q6ZSS3 439 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ACOT7LQ6ZUV0 252 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 AHSA2Q719I0 299 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms