RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	HUS1B	Q8NHY5	278 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	HAVCR2	Q8TDQ0	301 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	ASB11	Q8WXH4	323 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	GATAD2B	Q8WXI9	593 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	ING5	Q8WYH8	240 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	TMEM159	Q96B96	161 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF582	Q96NG8	517 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	WDR77	Q9BQA1	342 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	FAM83C	Q9BQN1	747 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	LMAN2L	Q9H0V9	348 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	GDE1	Q9NZC3	331 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	KCND3	Q9UK17	655 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	CAMK2A	Q9UQM7	478 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	DLGAP4	Q9Y2H0	992 aa		10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	MUC22	E2RYF6	1773 aa	Predicted RBP	10.02	□□□□□ -0.81
CHD2-223	ENST00000636306	SHISA3	A0PJX4	238 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SIGLEC5	O15389	551 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	EIF4E2	O60573	245 aa	Known RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	CHRM5	P08912	532 aa	Predicted RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	TIMP2	P16035	220 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	ABO	P16442	354 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SDC1	P18827	310 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	CSNK1E	P49674	416 aa	Known RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	AP3S2	P59780	193 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	RAB2A	P61019	212 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	NTHL1	P78549	312 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	BDH1	Q02338	343 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SIGLEC14	Q08ET2	396 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	ILF3	Q12906	894 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SEC23B	Q15437	767 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	RGN	Q15493	299 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	FNDC3B	Q53EP0	1204 aa	Known RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	HSD11B1L	Q7Z5J1	315 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	KLB	Q86Z14	1044 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	ZFP82	Q8N141	532 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SAMD12	Q8N8I0	201 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	POMGNT2	Q8NAT1	580 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	CSGALNACT1	Q8TDX6	532 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	CYB5D2	Q8WUJ1	264 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	GLYATL1	Q969I3	302 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	VOPP1	Q96AW1	172 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF707	Q96C28	371 aa	Predicted RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	RNFT2	Q96EX2	444 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	PEX11G	Q96HA9	241 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	LURAP1	Q96LR2	239 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	NOTCH4	Q99466	2003 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	NEU1	Q99519	415 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	FUZ	Q9BT04	418 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	LINC00597	Q9H2U6	94 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	EPHX3	Q9H6B9	360 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	COLCA2	A8K830	154 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	C1QTNF3-AMACR	E9PGA6	284 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	RFXAP	O00287	272 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	FAAH	O00519	579 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	RDH16	O75452	317 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	REM1	O75628	298 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	AKR7A3	O95154	331 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	PAPLN	O95428	1278 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	MT-ND4	P03905	459 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SERPIND1	P05546	499 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	CD3G	P09693	182 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	NUDT7	P0C024	238 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	CD53	P19397	219 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	RAB4A	P20338	218 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	VAMP1	P23763	118 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	TSPAN7	P41732	249 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SLC6A12	P48065	614 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	PRLHR	P49683	370 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	RBP2	P50120	134 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	HCCS	P53701	268 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SLC3A1	Q07837	685 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	GPM6B	Q13491	265 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	NDUFA9	Q16795	377 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SYT14P1	Q58G82	188 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	CRB2	Q5IJ48	1285 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	OR2G6	Q5TZ20	316 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SLC30A8	Q8IWU4	369 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	KLHDC8A	Q8IYD2	350 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	C7orf61	Q8IZ16	206 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	HDDC3	Q8N4P3	179 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	EID2	Q8N6I1	236 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	OR11G2	Q8NGC1	345 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	AKR7L	Q8NHP1	331 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	OSTF1	Q92882	214 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	FGF11	Q92914	225 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF514	Q96K75	400 aa	Predicted RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	ZC3H10	Q96K80	434 aa	Known RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	CMTM3	Q96MX0	182 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	TSSK3	Q96PN8	268 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	TEFM	Q96QE5	360 aa	Known RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SSX3	Q99909	188 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	C2orf88	Q9BSF0	95 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	RIOK2	Q9BVS4	552 aa	Known RBP	10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	SEC11C	Q9BY50	192 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	DEC1	Q9P2X7	70 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	HCFC2	Q9Y5Z7	792 aa		10.01	□□□□□ -0.81
CHD2-223	ENST00000636306	ANKRD61	A6NGH8	418 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	SLC9B1P1	A6NJY1	282 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	LOC730098	B7Z3J9	87 aa		10	□□□□□ -0.81

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