RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 C1orf229Q6ZS94 237 aaPredicted RBP15.77■□□□□ 0.12
CLN6-212ENST00000636020 C1orf162Q8NEQ5 155 aaPredicted RBP15.77■□□□□ 0.12
CLN6-212ENST00000636020 OR52E4Q8NGH9 312 aa15.77■□□□□ 0.12
CLN6-212ENST00000636020 PHOSPHO1Q8TCT1 267 aa15.77■□□□□ 0.12
CLN6-212ENST00000636020 GPR119Q8TDV5 335 aa15.77■□□□□ 0.12
CLN6-212ENST00000636020 OR5B2Q96R09 309 aa15.77■□□□□ 0.12
CLN6-212ENST00000636020 SUCNR1Q9BXA5 334 aa15.77■□□□□ 0.12
CLN6-212ENST00000636020 CDC42EP4Q9H3Q1 356 aaKnown RBP15.77■□□□□ 0.12
CLN6-212ENST00000636020 ZNF716A6NP11 495 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 OR4F21O95013 312 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 H6PDO95479 791 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 RPS17P08708 135 aaKnown RBP15.76■□□□□ 0.11
CLN6-212ENST00000636020 ACP2P11117 423 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 TSPAN8P19075 237 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 NTSP30990 170 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 GSTM5P46439 218 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 CDH13P55290 713 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 SUMO3P55854 103 aaPredicted RBP15.76■□□□□ 0.11
CLN6-212ENST00000636020 MTERF4Q7Z6M4 381 aaKnown RBP15.76■□□□□ 0.11
CLN6-212ENST00000636020 ZCCHC24Q8N2G6 241 aaKnown RBP15.76■□□□□ 0.11
CLN6-212ENST00000636020 CDRT4Q8N9R6 151 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 UBASH3BQ8TF42 649 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 WDR60Q8WVS4 1066 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 LRRC37BQ96QE4 947 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 EBPLQ9BY08 206 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 ACPTQ9BZG2 426 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 DCTN4Q9UJW0 460 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 FBXO9Q9UK97 447 aaPredicted RBP15.76■□□□□ 0.11
CLN6-212ENST00000636020 TMCO1Q9UM00 188 aa15.76■□□□□ 0.11
CLN6-212ENST00000636020 A0A096LPK6 155 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 HMX2A2RU54 273 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 MSMBP08118 114 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 GSTA2P09210 222 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 ANXA4P09525 319 aaPredicted RBP15.75■□□□□ 0.11
CLN6-212ENST00000636020 DDX5P17844 614 aaKnown RBP15.75■□□□□ 0.11
CLN6-212ENST00000636020 PRPS1P60891 318 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 UBA52P62987 128 aaKnown RBP15.75■□□□□ 0.11
CLN6-212ENST00000636020 MROH9Q5TGP6 573 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 C9orf135Q5VTT2 229 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 KLHL7Q8IXQ5 586 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 ZNF527Q8NB42 609 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 SLC16A11Q8NCK7 471 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 ZNF483Q8TF39 744 aaPredicted RBP15.75■□□□□ 0.11
CLN6-212ENST00000636020 LPAR2Q9HBW0 351 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 MIEF1Q9NQG6 463 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 CARD8Q9Y2G2 431 aa15.75■□□□□ 0.11
CLN6-212ENST00000636020 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 LYNX1G3V0Z9 82 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 ETV2O00321 342 aaPredicted RBP15.74■□□□□ 0.11
CLN6-212ENST00000636020 MRPL33O75394 65 aaKnown RBP15.74■□□□□ 0.11
CLN6-212ENST00000636020 AVPP01185 164 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 KRT6AP02538 564 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 KRT6BP04259 564 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 ERCC1P07992 297 aaPredicted RBP15.74■□□□□ 0.11
CLN6-212ENST00000636020 LYNX1P0DP58 116 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 TYK2P29597 1187 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 KRT6CP48668 564 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 DIO1P49895 249 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 OCLNQ16625 522 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 DUSP5Q16690 384 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 FAM71E1Q6IPT2 247 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 TMPPEQ6ZT21 453 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 ZNF551Q7Z340 670 aaPredicted RBP15.74■□□□□ 0.11
CLN6-212ENST00000636020 MTDHQ86UE4 582 aaKnown RBP15.74■□□□□ 0.11
CLN6-212ENST00000636020 CLDND2Q8NHS1 167 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 FBXO30Q8TB52 745 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 GIMAP5Q96F15 307 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 DOK1Q99704 481 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 SIRT5Q9NXA8 310 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 SNX24Q9Y343 169 aa15.74■□□□□ 0.11
CLN6-212ENST00000636020 IGHV1-18A0A0C4DH31 117 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 GPR171O14626 319 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 EIF3HO15372 352 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLN6-212ENST00000636020 WNT11O96014 354 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 IGFBP1P08833 259 aaPredicted RBP15.73■□□□□ 0.11
CLN6-212ENST00000636020 RNF144AP50876 292 aaPredicted RBP15.73■□□□□ 0.11
CLN6-212ENST00000636020 ZNF763Q0D2J5 394 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 CCNJQ5T5M9 372 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 C3orf33Q6P1S2 294 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 FAHD2BQ6P2I3 314 aaPredicted RBP15.73■□□□□ 0.11
CLN6-212ENST00000636020 VHLLQ6RSH7 139 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 IKBIPQ70UQ0 350 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 TEX29Q8N6K0 151 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 CEP70Q8NHQ1 597 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 CDC26Q8NHZ8 85 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 FAHD2AQ96GK7 314 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 SLC6A7Q99884 636 aa15.73■□□□□ 0.11
CLN6-212ENST00000636020 WBP11Q9Y2W2 641 aaKnown RBP15.73■□□□□ 0.11
CLN6-212ENST00000636020 LOC105371242A0A075B767 164 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 SMIM24O75264 130 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 ULK1O75385 1050 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 RBP1P09455 135 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 ZFP36P26651 326 aaKnown RBP15.72■□□□□ 0.11
CLN6-212ENST00000636020 SERPINB4P48594 390 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 PRKAG1P54619 331 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 CSNK2A1P68400 391 aaPredicted RBP15.72■□□□□ 0.11
CLN6-212ENST00000636020 TGFBR3Q03167 851 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 BTKQ06187 659 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 NDUFAF6Q330K2 333 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 KLHL26Q53HC5 615 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms