RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 UCHL1P09936 223 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 C6P13671 934 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 F3P13726 295 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 MAT2AP31153 395 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 PDX1P52945 283 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 DUSP2Q05923 314 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF750Q32MQ0 723 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 LY6G5CQ5SRR4 150 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 B3GNTL1Q67FW5 361 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 GLDNQ6ZMI3 551 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 LINGO2Q7L985 606 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 HDDC3Q8N4P3 179 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 ACOT4Q8N9L9 421 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 TRMT61BQ9BVS5 477 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 AUNIPQ9H7T9 357 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 ST6GALNAC2Q9UJ37 374 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF223Q9UK11 482 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 ING1Q9UK53 422 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 BAIAP2Q9UQB8 552 aa13.73□□□□□ -0.21
CACNA1A-220ENST00000635988 SNRPGP15A8MWD9 76 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 A8MXK9 166 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 SPINT1O43278 529 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ERI3O43414 337 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 SULT1B1O43704 296 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 FCMRO60667 390 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 MRPL3P09001 348 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 C8orf89P0DMQ9 161 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CXCL2P19875 107 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CALCRP30988 508 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 FXYD6P3P58550 94 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 MRPS10P82664 201 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 PRDX1Q06830 199 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 DBPQ10586 325 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CEBPEQ15744 281 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ZIC1Q15915 447 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 TFAP2EQ6VUC0 442 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 RPTNQ6XPR3 784 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 TET1Q8NFU7 2136 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 SCARB1Q8WTV0 552 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 PRSS27Q9BQR3 290 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 OR10A4Q9H209 315 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 LDAHQ9H6V9 325 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 TAS2R5Q9NYW4 299 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 PIPOXQ9P0Z9 390 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 KLHL9Q9P2J3 617 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CES1P1Q9UKY3 287 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 FLVCR2Q9UPI3 526 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CA5BQ9Y2D0 317 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF780BQ9Y6R6 833 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CASP8AP2Q9UKL3 1982 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 MYOFQ9NZM1 2061 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 TBC1D3KA0A087X1G2 549 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 TBC1D3BA6NDS4 549 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 TBC1D3FA6NER0 549 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ANTXRLA6NF34 631 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 NRG2O14511 850 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 MID1O15344 667 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CREBL2O60519 120 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 GMDSO60547 372 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 OR2A4O95047 310 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 IL5P05113 134 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CD1AP06126 327 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 NMBP08949 121 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF3P17036 446 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ATP5A1P25705 553 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 PSMA6P60900 246 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ERVK-21P61565 698 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ST8SIA6P61647 398 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 CTAG1AP78358 180 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 GAS6Q14393 721 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF273Q14593 569 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 TBC1D3GQ6DHY5 549 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ABHD17CQ6PCB6 329 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 FRRS1Q6ZNA5 592 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 ESPNLQ6ZVH7 1005 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 OR5J2Q8NH18 312 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 OR4C6Q8NH72 309 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 LGALS14Q8TCE9 139 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 TMEM239Q8WW34 195 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 KAT2AQ92830 837 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 RIT1Q92963 219 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 MS4A6EQ96DS6 147 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 SMIM19Q96E16 107 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC35A4Q96G79 324 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 OR2A7Q96R45 310 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 AICDAQ9GZX7 198 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 PRDM7Q9NQW5 492 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 WDR45Q9Y484 360 aa13.72□□□□□ -0.21
CACNA1A-220ENST00000635988 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 A0A0B4J203 849 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 ZNF879B4DU55 563 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 MCRIP1C9JLW8 97 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 TGM5O43548 720 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 KRT33AO76009 404 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 ZIC2O95409 532 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 THBS1P07996 1170 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 SLC2A5P22732 501 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 ACTA2P62736 377 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 ACTG2P63267 376 aa13.71□□□□□ -0.21
CACNA1A-220ENST00000635988 HTR4Q13639 388 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms