RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CSTAP01040 98 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 MMP11P24347 488 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ELK4P28324 431 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 UGT2B15P54855 530 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 NRG3P56975 720 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 RNF4P78317 190 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 PLCXD2Q0VAA5 305 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 KEAP1Q14145 624 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 CD226Q15762 336 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 RRM2BQ7LG56 351 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF550Q7Z398 422 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 THAP5Q7Z6K1 395 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 MEX3DQ86XN8 651 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC34A3Q8N130 599 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 PARP8Q8N3A8 854 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 SETD9Q8NE22 299 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 OR4K5Q8NGD3 323 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 OR2Y1Q8NGV0 311 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 THAP4Q8WY91 577 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF524Q96C55 264 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 HRASLS5Q96KN8 279 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ADOQ96SZ5 270 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF559Q9BR84 538 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 AASSQ9UDR5 926 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC35A3Q9Y2D2 325 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 MYRFQ9Y2G1 1151 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 PCDHGB7Q9Y5F8 929 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 GMPPBQ9Y5P6 360 aa8.7□□□□□ -1.02
PDLIM5-223ENST00000627587 TRAPPC13A5PLN9 417 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 SCDO00767 359 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 ICOSLGO75144 302 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 UTS2O95399 124 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 IGFBP1P08833 259 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 F8A1P23610 371 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 ABCD3P28288 659 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 IFNGR2P38484 337 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 FOLR3P41439 243 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC26A5P58743 744 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 CD47Q08722 323 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 APOFQ13790 326 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 PCOLCEQ15113 449 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 OR1Q1Q15612 314 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF730Q6ZMV8 503 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF786Q8N393 782 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 OR5L2Q8NGL0 311 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 OR8K3Q8NH51 312 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 NUBPLQ8TB37 319 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 ACOT11Q8WXI4 607 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 UBE2FQ969M7 185 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 OMA1Q96E52 524 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 APOL4Q9BPW4 351 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 DGCR6LQ9BY27 220 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 TMEM27Q9HBJ8 222 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 HS3ST3B1Q9Y662 390 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 BSNQ9UPA5 3926 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 DOCK10Q96BY6 2186 aa8.69□□□□□ -1.02
PDLIM5-223ENST00000627587 TRBV11-1A0A0K0K1C0 115 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 NADKO95544 446 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 TBXA2RP21731 343 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 RYKP34925 604 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 ADH7P40394 386 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 OMPP47874 163 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 ESRRGP62508 458 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 RPP38P78345 283 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 IL5RAQ01344 420 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 DNASE1L3Q13609 305 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 MEP1AQ16819 746 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 C1orf94Q6P1W5 598 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF613Q6PF04 617 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF440Q8IYI8 595 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 POGLUT1Q8NBL1 392 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 TMEM255BQ8WV15 326 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 SGCDQ92629 289 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 UCK2Q9BZX2 261 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 KRCC1Q9NPI7 259 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC7A7Q9UM01 511 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 PCDHGA9Q9Y5G4 932 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 MRPS18BQ9Y676 258 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 HSPE1-MOB4S4R3N1 261 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 LRRK2Q5S007 2527 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 IGHV1-45A0A0A0MS14 117 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 A0A0B4J2E0 115 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 A0A1B0GX12 115 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 A0A1W2PQ72 361 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 A6NHS1 94 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 TTLL8A6PVC2 850 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 B4DXG7 233 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 KLF4O43474 513 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 PIP5K1CO60331 668 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 ZFAND5O76080 213 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 IGHEP01854 428 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 CELA2AP08217 269 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 UBL4AP11441 157 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 COX6A1P12074 109 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 OSMP13725 252 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 PTNP21246 168 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 CHMP24386 653 aa8.68□□□□□ -1.02
PDLIM5-223ENST00000627587 MST1P26927 711 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms