RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TACO1Q9BSH4 297 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 PIGMQ9H3S5 423 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 KLHL28Q9NXS3 571 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 DNAJB12Q9NXW2 375 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 SLAMF8Q9P0V8 285 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 Q9UFV3 132 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 SLC13A4Q9UKG4 626 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNF443Q9Y2A4 671 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 HECTD1Q9ULT8 2610 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 NAV2Q8IVL1 2488 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 CACNA1CQ13936 2221 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 EIF1AYO14602 144 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 HNRNPRO43390 633 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 SNX3O60493 162 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 TMIGD3P0DMS9 266 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 EIF1AXP47813 144 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 CLDN15P56746 228 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 SESN3P58005 492 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 SCARB2Q14108 478 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 FBXL19-AS1Q494R0 122 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNF311Q5JNZ3 666 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 ERICH5Q6P6B1 374 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 GGNQ86UU5 652 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 RETREG3Q86VR2 466 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 SNX32Q86XE0 403 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 RPRMLQ8N4K4 120 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 RASSF5Q8WWW0 418 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 LRRC58Q96CX6 371 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 ELAC2Q9BQ52 826 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 PINK1Q9BXM7 581 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 PRRG4Q9BZD6 226 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 GP6Q9HCN6 339 aa12.61□□□□□ -0.39
SNRPA1-216ENST00000626000 CENPVL1A0A0U1RR11 272 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 OIP5O43482 229 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 DNPH1O43598 174 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 SLC1A3P43003 542 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 PCYT1AP49585 367 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 ASCL1P50553 236 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 CLDN20P56880 219 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 CSNK2A1P68400 391 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 MERTKQ12866 999 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 MAPK11Q15759 364 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 NDUFAF6Q330K2 333 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 HBMQ6B0K9 141 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 REP15Q6BDI9 236 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 SEM1Q6ZVN7 128 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 NET1Q7Z628 596 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 PATL1Q86TB9 770 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 CCDC71Q8IV32 467 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 SLC43A2Q8N370 569 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 TNIP2Q8NFZ5 429 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 OR5M1Q8NGP8 315 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 OR10D3Q8NH80 312 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 NFKBIDQ8NI38 313 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 POC1BQ8TC44 478 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 ZG16BQ96DA0 208 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 SPOCK3Q9BQ16 436 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 ECSITQ9BQ95 431 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 QRSL1Q9H0R6 528 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 KAT8Q9H7Z6 458 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 RNF122Q9H9V4 155 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 EFCAB1Q9HAE3 211 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 FANCFQ9NPI8 374 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 CHRNA9Q9UGM1 479 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 PCNX3Q9H6A9 2034 aa12.6□□□□□ -0.39
SNRPA1-216ENST00000626000 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 FAM90A27PA6NNH2 459 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 FBP2O00757 339 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNF208O43345 1280 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 DCTN3O75935 186 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 TOXO94900 526 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 IFNA14P01570 189 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 C1QCP02747 245 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 COX6B1P14854 86 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 PRDX6P30041 224 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 RYKP34925 604 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 PCGF2P35227 344 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 POLR2HP52434 150 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 SUCLG1P53597 346 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 SEC24CP53992 1094 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 CARD18P57730 90 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 MTPNP58546 118 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 EPS8Q12929 822 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 PON3Q15166 354 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 RNPS1Q15287 305 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 WBP2NLQ6ICG8 309 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 DHRS4L2Q6PKH6 230 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNF836Q6ZNA1 936 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 PLEKHM3Q6ZWE6 761 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 KIF18BQ86Y91 864 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 CNOT9Q92600 299 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 MAL2Q969L2 176 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 ZHX1-C8orf76Q96EF9 292 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 HOPXQ9BPY8 73 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 PACSIN3Q9UKS6 424 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 ARL2BPQ9Y2Y0 163 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 HDGFL3Q9Y3E1 203 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 HEATR5AQ86XA9 2040 aa12.59□□□□□ -0.39
SNRPA1-216ENST00000626000 MED12Q93074 2177 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms