RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TRIM49D1C9J1S8 452 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 UPK1AO00322 258 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 PSMG1O95456 288 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 BCL10O95999 233 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 NUDT17P0C025 328 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 NTF4P34130 210 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 ARL1P40616 181 aaPredicted RBP12.05□□□□□ -0.48
SNX1-214ENST00000625244 KHKP50053 298 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 TRA2BP62995 288 aaKnown RBP12.05□□□□□ -0.48
SNX1-214ENST00000625244 OR7E24Q6IFN5 339 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 TMEM107Q6UX40 140 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 CARM1Q86X55 608 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 BPIFB2Q8N4F0 458 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 C1orf52Q8N6N3 182 aaKnown RBP12.05□□□□□ -0.48
SNX1-214ENST00000625244 OR51F2Q8NH61 342 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 B4GALNT2Q8NHY0 566 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 UBASH3BQ8TF42 649 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 TAF15Q92804 592 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNX1-214ENST00000625244 MRGPRX4Q96LA9 322 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 LMF2Q9BU23 707 aaKnown RBP12.05□□□□□ -0.48
SNX1-214ENST00000625244 VPS11Q9H270 941 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 SLC35C2Q9NQQ7 365 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 SLC17A5Q9NRA2 495 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 ASB6Q9NWX5 421 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 TENM3Q9P273 2699 aa12.05□□□□□ -0.48
SNX1-214ENST00000625244 A0A087WV62 115 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 CCDC151A5D8V7 595 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 SMIM23A6NLE4 172 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 POM121CA8CG34 1229 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 WNT9BO14905 357 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 KCNH1O95259 989 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 C2P06681 752 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 NGFRP08138 427 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 IGFBP1P08833 259 aaPredicted RBP12.04□□□□□ -0.48
SNX1-214ENST00000625244 GFAPP14136 432 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 ADRA2CP18825 462 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 MPIP34949 423 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 ALDH18A1P54886 795 aaKnown RBP12.04□□□□□ -0.48
SNX1-214ENST00000625244 IFT88Q13099 833 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 CD226Q15762 336 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 PRSS53Q2L4Q9 553 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 C9orf135Q5VTT2 229 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 VHLLQ6RSH7 139 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 C1QL2Q7Z5L3 287 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 ZAR1Q86SH2 424 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 SAMD14Q8IZD0 417 aaPredicted RBP12.04□□□□□ -0.48
SNX1-214ENST00000625244 RIBC1Q8N443 379 aaPredicted RBP12.04□□□□□ -0.48
SNX1-214ENST00000625244 MREGQ8N565 214 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 OR52E4Q8NGH9 312 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 C22orf15Q8WYQ4 148 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 ATP6V1E2Q96A05 226 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 APH1AQ96BI3 265 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 DUX5Q96PT3 197 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 ACSS1Q9NUB1 689 aaPredicted RBP12.04□□□□□ -0.48
SNX1-214ENST00000625244 GIMAP4Q9NUV9 329 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 ARGLU1Q9NWB6 273 aaPredicted RBP12.04□□□□□ -0.48
SNX1-214ENST00000625244 TBK1Q9UHD2 729 aa12.04□□□□□ -0.48
SNX1-214ENST00000625244 TLDC2A0PJX2 215 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 CCDC189A1A4V9 331 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 SYCE1LA8MT33 242 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 PDLIM1O00151 329 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 PDE5AO76074 875 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 PDYNP01213 254 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 JUNP05412 331 aaKnown RBP12.03□□□□□ -0.48
SNX1-214ENST00000625244 GAAP10253 952 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 SLC7A1P30825 629 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 CCNG1P51959 295 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 ZNHIT3Q15649 155 aaPredicted RBP12.03□□□□□ -0.48
SNX1-214ENST00000625244 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 C1QL4Q86Z23 238 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 OR2L13Q8N349 312 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 ZNF524Q96C55 264 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 BBS4Q96RK4 519 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 RACGAP1Q9H0H5 632 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 ELOVL6Q9H5J4 265 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 HHATLQ9HCP6 504 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 TREM2Q9NZC2 230 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 MALT1Q9UDY8 824 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 WNK2Q9Y3S1 2297 aa12.03□□□□□ -0.48
SNX1-214ENST00000625244 TRAV20A0A0B4J274 112 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 IGHV1-18A0A0C4DH31 117 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 OIP5O43482 229 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 SHBGP04278 402 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 ERCC1P07992 297 aaPredicted RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 RBMXP38159 391 aaKnown RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 NCBP2P52298 156 aaKnown RBP eCLIP12.02□□□□□ -0.49
SNX1-214ENST00000625244 IL13RA1P78552 427 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 IL1RL1Q01638 556 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 SRSF4Q08170 494 aaKnown RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 TRAF3Q13114 568 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 RASA2Q15283 850 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 TOMM34Q15785 309 aaPredicted RBP12.02□□□□□ -0.49
SNX1-214ENST00000625244 CROCCP2Q86T23 111 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 RNF217Q8TC41 542 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 ACMSDQ8TDX5 336 aa12.02□□□□□ -0.49
SNX1-214ENST00000625244 DOK1Q99704 481 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms