RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ARHGAP11BQ3KRB8 267 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 DCST2Q5T1A1 773 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 PRAMEF8Q5VWM4 474 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 PRAMEF7Q5VXH5 474 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 DESI1Q6ICB0 168 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 LRRC74BQ6ZQY2 392 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 ZAR1Q86SH2 424 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 PLCZ1Q86YW0 608 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 LACC1Q8IV20 430 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 WDSUB1Q8N9V3 476 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 FAM83FQ8NEG4 500 aaPredicted RBP11.47□□□□□ -0.57
PNKP-217ENST00000625216 GPR32P1Q8NGA4 272 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 GPR151Q8TDV0 419 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 LRTOMTQ8WZ04 291 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 ABTB1Q969K4 478 aaPredicted RBP11.47□□□□□ -0.57
PNKP-217ENST00000625216 RMND5BQ96G75 393 aaPredicted RBP11.47□□□□□ -0.57
PNKP-217ENST00000625216 PYURFQ96I23 114 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 TRNT1Q96Q11 434 aaKnown RBP11.47□□□□□ -0.57
PNKP-217ENST00000625216 SDF2Q99470 211 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 UGT2B28Q9BY64 529 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 ZNF350Q9GZX5 532 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 QRSL1Q9H0R6 528 aaKnown RBP11.47□□□□□ -0.57
PNKP-217ENST00000625216 MAGIXQ9H6Y5 334 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 GALNT9Q9HCQ5 603 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 FBXO34Q9NWN3 711 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 Q9UFV3 132 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 MRTO4Q9UKD2 239 aaKnown RBP11.47□□□□□ -0.57
PNKP-217ENST00000625216 LIPT1Q9Y234 373 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 MRPS18CQ9Y3D5 142 aaKnown RBP11.47□□□□□ -0.57
PNKP-217ENST00000625216 OR10H1Q9Y4A9 318 aa11.47□□□□□ -0.57
PNKP-217ENST00000625216 A0A0G2JPF8 293 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 CENPVL1A0A0U1RR11 272 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 NKX2-6A6NCS4 301 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 CD8B2A6NJW9 211 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 HNRNPCL2B2RXH8 293 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 HNRNPCL3B7ZW38 293 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 FCMRO60667 390 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 AK1P00568 194 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 IGKV1D-16P01601 117 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 HNRNPCL4P0DMR1 293 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 RAP2AP10114 183 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 CPN1P15169 458 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 BMP7P18075 431 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 CEACAM8P31997 349 aaPredicted RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 ADH7P40394 386 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 MAGEA2P43356 314 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 PSMD4P55036 377 aaKnown RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 KCNJ10P78508 379 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 HPCAP84074 193 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 CHRNB3Q05901 458 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 ACSF3Q4G176 576 aaPredicted RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 FAM98BQ52LJ0 330 aaKnown RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 EIPR1Q53HC9 387 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 WIPI1Q5MNZ9 446 aaPredicted RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 NSUN5P2Q63ZY6 315 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 TYW3Q6IPR3 259 aaKnown RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 FIGNL1Q6PIW4 674 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 YRDCQ86U90 279 aaKnown RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 COMTD1Q86VU5 262 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 DMRTC2Q8IXT2 367 aaPredicted RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 SMYD1Q8NB12 490 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 OR4N2Q8NGD1 307 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 ZPLD1Q8TCW7 415 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 RNF138Q8WVD3 245 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 NRG4Q8WWG1 115 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 WDYHV1Q96HA8 205 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 TPD52L3Q96J77 140 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 CHID1Q9BWS9 393 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 BTBD2Q9BX70 525 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 OR2B2Q9GZK3 357 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 RASSF4Q9H2L5 321 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 CALHM2Q9HA72 323 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 Q9N2J8 555 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 NPDC1Q9NQX5 325 aaPredicted RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 SDHAF3Q9NRP4 125 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 ADPRHL2Q9NX46 363 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 CALML5Q9NZT1 146 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 ZNF629Q9UEG4 869 aaPredicted RBP11.46□□□□□ -0.57
PNKP-217ENST00000625216 SLC6A5Q9Y345 797 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 WDR45Q9Y484 360 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 WIF1Q9Y5W5 379 aa11.46□□□□□ -0.57
PNKP-217ENST00000625216 NPIPA5A0A0B4J1W7 369 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 C2orf72A6NCS6 295 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 NPIPA7E9PJI5 369 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 DVL2O14641 736 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 KIAA0513O60268 411 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 KCNK2O95069 426 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 IL2RAP01589 272 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 NPIPA8P0DM63 369 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 ETS2P15036 469 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 RPS4Y1P22090 263 aaKnown RBP11.45□□□□□ -0.58
PNKP-217ENST00000625216 SRD5A2P31213 254 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 PEX19P40855 299 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 SELENOWP63302 87 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 VLDLRP98155 873 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 GNA13Q14344 377 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 DECR1Q16698 335 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 GLIPR1L2Q4G1C9 344 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 IQCCQ4KMZ1 466 aa11.45□□□□□ -0.58
PNKP-217ENST00000625216 SEM1Q6ZVN7 128 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms