RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 SMPDL3BQ92485 455 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 GTF2H4Q92759 462 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 OSTF1Q92882 214 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 REXO5Q96IC2 774 aaKnown RBP11.15□□□□□ -0.62
LINC00963-217ENST00000624009 NPAS1Q99742 590 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 THUMPD3Q9BV44 507 aaKnown RBP11.15□□□□□ -0.62
LINC00963-217ENST00000624009 SLC38A1Q9H2H9 487 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 PLSCR4Q9NRQ2 329 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 SERINC1Q9NRX5 453 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 RASSF1Q9NS23 344 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 ACER3Q9NUN7 267 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 P2RX2Q9UBL9 471 aa11.15□□□□□ -0.62
LINC00963-217ENST00000624009 SPIN1Q9Y657 262 aaPredicted RBP11.15□□□□□ -0.62
LINC00963-217ENST00000624009 A0A096LPI6 279 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 CENPVL1A0A0U1RR11 272 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 TMEM247A6NEH6 219 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 C9JVG2 144 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 TNFSF11O14788 317 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 DNPH1O43598 174 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 EFNA2O43921 213 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 GMFGO60234 142 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 UQCRBP14927 111 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 PPIBP23284 216 aaKnown RBP11.14□□□□□ -0.63
LINC00963-217ENST00000624009 CD79BP40259 229 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 AGFG1P52594 562 aaKnown RBP11.14□□□□□ -0.63
LINC00963-217ENST00000624009 CHRNEQ04844 493 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 TOMM34Q15785 309 aaPredicted RBP11.14□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF239Q16600 458 aaKnown RBP11.14□□□□□ -0.63
LINC00963-217ENST00000624009 BTLAQ7Z6A9 289 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 PEX5LQ8IYB4 626 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 ZZZ3Q8IYH5 903 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 ARFGAP2Q8N6H7 521 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 TMCO5AQ8N6Q1 288 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 CNEP1R1Q8N9A8 125 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 OR9I1Q8NGQ6 314 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 TSPEARQ8WU66 669 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 NINJ1Q92982 152 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 SLC35B4Q969S0 331 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 KLHDC3Q9BQ90 382 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 PRRG4Q9BZD6 226 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 OR10A4Q9H209 315 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 NDRG3Q9UGV2 375 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 PROCRQ9UNN8 238 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 DSCAMO60469 2012 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 ALPK2Q86TB3 2170 aa11.14□□□□□ -0.63
LINC00963-217ENST00000624009 C2CD3Q4AC94 2353 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 CXCL13O43927 109 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 SASH3O75995 380 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 PLGP00747 810 aaPredicted RBP11.13□□□□□ -0.63
LINC00963-217ENST00000624009 GSNP06396 782 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 THBS1P07996 1170 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 CHRM4P08173 479 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 TFPTP0C1Z6 253 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 UBTFL6P0CB48 400 aaPredicted RBP11.13□□□□□ -0.63
LINC00963-217ENST00000624009 NR2F1P10589 423 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 PPP3CBP16298 524 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 IL7RP16871 459 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 HOXB9P17482 250 aaPredicted RBP11.13□□□□□ -0.63
LINC00963-217ENST00000624009 SLC7A1P30825 629 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 CCR4P51679 360 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 CASP9P55211 416 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 CTBP2P56545 445 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 SESN3P58005 492 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 KRTAP10-9P60411 292 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 DSTNP60981 165 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 SQLEQ14534 574 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 SYPL1Q16563 259 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 TMEM176BQ3YBM2 270 aaPredicted RBP11.13□□□□□ -0.63
LINC00963-217ENST00000624009 COX20Q5RI15 118 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 C6orf10Q5SRN2 563 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 METTL21CQ5VZV1 264 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 VWA1Q6PCB0 445 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF474Q6S9Z5 364 aaPredicted RBP11.13□□□□□ -0.63
LINC00963-217ENST00000624009 PLXDC2Q6UX71 529 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 GRINAQ7Z429 371 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 LUZP2Q86TE4 346 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 CDH24Q86UP0 819 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 TMEM200AQ86VY9 491 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 FUNDC1Q8IVP5 155 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 ANKFN1Q8N957 763 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 VPS33AQ96AX1 596 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 ZG16BQ96DA0 208 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 MARK4Q96L34 752 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 EBF4Q9BQW3 602 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 CCDC106Q9BWC9 280 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 PAIP1Q9H074 479 aaKnown RBP11.13□□□□□ -0.63
LINC00963-217ENST00000624009 ARMC7Q9H6L4 198 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 COQ10BQ9H8M1 238 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 BCL2L10Q9HD36 194 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 SLC52A3Q9NQ40 469 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 SLC6A13Q9NSD5 602 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 TRIM33Q9UPN9 1127 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 CORO2BQ9UQ03 480 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 PCDHB14Q9Y5E9 798 aa11.13□□□□□ -0.63
LINC00963-217ENST00000624009 HEATR1Q9H583 2144 aaKnown RBP11.12□□□□□ -0.63
LINC00963-217ENST00000624009 A0A0G2JPF8 293 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 SH3D21A4FU49 640 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 CDHR4A6H8M9 788 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 HNRNPCL2B2RXH8 293 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 HNRNPCL3B7ZW38 293 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms