RNA–Protein interactions for RNA: ENST00000622120.1

LINC00963-213, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-213	ENST00000622120	PAMR1	Q6UXH9	720 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	BEND4	Q6ZU67	534 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	FCRLA	Q7L513	359 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	ZNF563	Q8TA94	476 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	LRRC8C	Q8TDW0	803 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	TRNT1	Q96Q11	434 aa	Known RBP	11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	FOXC2	Q99958	501 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	SRXN1	Q9BYN0	137 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	C12orf49	Q9H741	205 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	RMND5A	Q9H871	391 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	ACER3	Q9NUN7	267 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	ZIM2	Q9NZV7	527 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	USH1C	Q9Y6N9	552 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	FREM1	Q5H8C1	2179 aa		11.15	□□□□□ -0.62
LINC00963-213	ENST00000622120	ITPR3	Q14573	2671 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120		A0A1W2PNR3	127 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	PRKD3	O94806	890 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	RAF1	P04049	648 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	NR2F1	P10589	423 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	AGTR1	P30556	359 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	CCKAR	P32238	428 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	RYK	P34925	604 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	PGM1	P36871	562 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	SESN3	P58005	492 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	RAC3	P60763	192 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	KCNJ10	P78508	379 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	CHRNE	Q04844	493 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	KEAP1	Q14145	624 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	SYPL1	Q16563	259 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	AP1AR	Q63HQ0	302 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	LRRC74B	Q6ZQY2	392 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	MSANTD1	Q6ZTZ1	278 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	ZNF550	Q7Z398	422 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	MAVS	Q7Z434	540 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	MIER2	Q8N344	545 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	SLC43A2	Q8N370	569 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	ARFGAP2	Q8N6H7	521 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	GOLGA6L1	Q8N7Z2	621 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	ANKFN1	Q8N957	763 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	PNPT1	Q8TCS8	783 aa	Known RBP	11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	RNF128	Q8TEB7	428 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	ABHD3	Q8WU67	409 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	DYDC1	Q8WWB3	177 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	ZNF524	Q96C55	264 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	ZC3HAV1L	Q96H79	300 aa	Known RBP	11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	ATP6V1G3	Q96LB4	118 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	OR5B2	Q96R09	309 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	OR52B2	Q96RD2	323 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	QRSL1	Q9H0R6	528 aa	Known RBP	11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	COQ10B	Q9H8M1	238 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	PLEKHF2	Q9H8W4	249 aa		11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	SPIN1	Q9Y657	262 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC00963-213	ENST00000622120	PRAMEF27	A3QJZ7	478 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	POLR3G	O15318	223 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	DNAJA2	O60884	412 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	C1QC	P02747	245 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	PPP3CB	P16298	524 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	CRYGS	P22914	178 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	APOBEC1	P41238	236 aa	Known RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	MAGEA8	P43361	318 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	POLR2J	P52435	117 aa	Known RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	STX1B	P61266	288 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	GNA13	Q14344	377 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	COX20	Q5RI15	118 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	ANKRD34A	Q69YU3	496 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	EPGN	Q6UW88	154 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	PLEKHM3	Q6ZWE6	761 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	HMGN2P46	Q86SG4	172 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	TUSC5	Q8IXB3	177 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	CMIP	Q8IY22	773 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	FAM71C	Q8NEG0	241 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	PMM1	Q92871	262 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	ZG16B	Q96DA0	208 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	PIK3IP1	Q96FE7	263 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	ITCH	Q96J02	903 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	C7orf26	Q96N11	449 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	TACO1	Q9BSH4	297 aa	Known RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	GP6	Q9HCN6	339 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	EXOSC3	Q9NQT5	275 aa	Known RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	KLHL13	Q9P2N7	655 aa		11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	MAP1A	P78559	2803 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00963-213	ENST00000622120	IGHV3-15	A0A0B4J1V0	119 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	FAM234B	A2RU67	622 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	SULT2B1	O00204	365 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	ATE1	O95260	518 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	TGDS	O95455	350 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	YES1	P07947	543 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	CHRM4	P08173	479 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	ZCCHC18	P0CG32	403 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	TFPI	P10646	304 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	NID1	P14543	1247 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	IL7R	P16871	459 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	ENPP1	P22413	925 aa		11.12	□□□□□ -0.63
LINC00963-213	ENST00000622120	CRAT	P43155	626 aa		11.12	□□□□□ -0.63

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