RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	HTR1F	P30939	366 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	PYCR1	P32322	319 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR12D2	P58182	307 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	SLC22A10	Q63ZE4	541 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	ELP2	Q6IA86	826 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR52I2	Q8NH67	350 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	CD99L2	Q8TCZ2	262 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	ARSG	Q96EG1	525 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	PELO	Q9BRX2	385 aa	Known RBP	13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	ACTR6	Q9GZN1	396 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR52A5	Q9H2C5	316 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	BCL2L10	Q9HD36	194 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	MLX	Q9UH92	298 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	NPTN	Q9Y639	398 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	C17orf113	A0A1B0GUU1	675 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	CXCL14	O95715	111 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	EGF	P01133	1207 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	FGF2	P09038	288 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	BMP7	P18075	431 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	S100A11	P31949	105 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	TRHR	P34981	398 aa	Predicted RBP	13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	STAT5A	P42229	794 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR8K3	Q8NH51	312 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	LGALS14	Q8TCE9	139 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	ADAMTS15	Q8TE58	950 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	SCARB1	Q8WTV0	552 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	KCTD12	Q96CX2	325 aa	Known RBP	13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	LRIG1	Q96JA1	1093 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	C4orf36	Q96KX1	117 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	PELI2	Q9HAT8	420 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	NOX3	Q9HBY0	568 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	SLC23A2	Q9UGH3	650 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	PLXND1	Q9Y4D7	1925 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	ANTXRL	A6NF34	631 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	AIP	O00170	330 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	TBX19	O60806	448 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	SDC3	O75056	442 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	PTP4A3	O75365	173 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	NFATC1	O95644	943 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	IGHA1	P01876	353 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	PRNP	P04156	253 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	SLC35G4	P0C7Q5	338 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	MMP15	P51511	669 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	CLDN12	P56749	244 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	GPR85	P60893	370 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	PITPNA	Q00169	270 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	RAB42	Q8N4Z0	105 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	MRPS24	Q96EL2	167 aa	Known RBP	13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	SEMA4C	Q9C0C4	833 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	MARK1	Q9P0L2	795 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	CYB5R1	Q9UHQ9	305 aa		13.35	□□□□□ -0.27
SYNRG-231	ENST00000622045	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045		H0YC42	278 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	SMAD9	O15198	467 aa	Known RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	HOXB3	P14651	431 aa	Predicted RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	HCCS	P53701	268 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	FNDC3B	Q53EP0	1204 aa	Known RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	HES5	Q5TA89	166 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	HDDC3	Q8N4P3	179 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	NUP43	Q8NFH3	380 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR5M1	Q8NGP8	315 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	TMEM255B	Q8WV15	326 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	DERL3	Q96Q80	235 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	KLHL31	Q9H511	634 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	CCDC86	Q9H6F5	360 aa	Known RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	SYNDIG1	Q9H7V2	258 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	PRDM9	Q9NQV7	894 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	TUBAL3	A6NHL2	446 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR5F1	O95221	314 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	GYPB	P06028	91 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	CSNK2A2	P19784	350 aa	Predicted RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	MC3R	P41968	323 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	OMP	P47874	163 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	SEC61A1	P61619	476 aa	Known RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	METTL11B	Q5VVY1	283 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	UBE3D	Q7Z6J8	389 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR52L1	Q8NGH7	329 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR1S1	Q8NH92	325 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR7D2	Q96RA2	312 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	PCBD2	Q9H0N5	130 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZNF304	Q9HCX3	659 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	SLC6A20	Q9NP91	592 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	PRKAG2	Q9UGJ0	569 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	EXOG	Q9Y2C4	368 aa	Known RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045		D6RAR5	112 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	CYB561A3	Q8NBI2	242 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	OR56A1	Q8NGH5	318 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	GHSR	Q92847	366 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	SLC41A3	Q96GZ6	507 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	IFT27	Q9BW83	186 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	GPR34	Q9UPC5	381 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	ERVK-19	Q9WJR5	959 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	ATG4B	Q9Y4P1	393 aa		13.34	□□□□□ -0.27
SYNRG-231	ENST00000622045	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.33	□□□□□ -0.28
SYNRG-231	ENST00000622045		A0A1W2PS29	197 aa		13.33	□□□□□ -0.28
SYNRG-231	ENST00000622045	FCMR	O60667	390 aa		13.33	□□□□□ -0.28

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