RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 LILRA2Q8N149 483 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 OR52P1PQ8NH57 321 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 OR2V1Q8NHB1 315 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 BBS10Q8TAM1 723 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 WDR60Q8WVS4 1066 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 FIG4Q92562 907 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 CNOT9Q92600 299 aaKnown RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 MAL2Q969L2 176 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 ZNF845Q96IR2 970 aaPredicted RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 DOCK7Q96N67 2140 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 CGREF1Q99674 301 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 THUMPD3Q9BV44 507 aaKnown RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 CCDC106Q9BWC9 280 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 SFXN3Q9BWM7 321 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 UCK2Q9BZX2 261 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 ADAM19Q9H013 955 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 KAT8Q9H7Z6 458 aaKnown RBP7.41□□□□□ -1.22
NEK3-209ENST00000618856 KCNJ16Q9NPI9 418 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 STOML1Q9UBI4 398 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 CORO2BQ9UQ03 480 aa7.41□□□□□ -1.22
NEK3-209ENST00000618856 ABCA12Q86UK0 2595 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 A0A1W2PNV4 684 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 NKX2-6A6NCS4 301 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 SLC22A20A6NK97 555 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 BBIP1A8MTZ0 92 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 AP3D1O14617 1153 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 ANGPT2O15123 496 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 GMFGO60234 142 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 SNX3O60493 162 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 CGAP01215 116 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 PABPC4LP0CB38 370 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 UBTFL6P0CB48 400 aaPredicted RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 TMIGD3P0DMS9 266 aaPredicted RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 IL7RP16871 459 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 PGCP20142 388 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 DRD4P21917 467 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 TCEA1P23193 301 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 FKBP2P26885 142 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 PRKAR1BP31321 381 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 LSP1P33241 339 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 OPRM1P35372 400 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 APOBEC1P41238 236 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 KIR2DL2P43627 348 aaPredicted RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 CLK1P49759 484 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 MAP2K6P52564 334 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 SEC24CP53992 1094 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 RPS3AP61247 264 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 CDK6Q00534 326 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 SRYQ05066 204 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 RBBP4Q09028 425 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 SELENBP1Q13228 472 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 SELPLGQ14242 412 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 TRMT5Q32P41 509 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 LIN52Q52LA3 116 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 RPS26P11Q5JNZ5 115 aaPredicted RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 GCNT6Q5T4J0 391 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 MRPL2Q5T653 305 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 ZNF787Q6DD87 383 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 REEP3Q6NUK4 255 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 C8orf82Q6P1X6 216 aaPredicted RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 DHRS4L2Q6PKH6 230 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 PLXDC2Q6UX71 529 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 GRINAQ7Z429 371 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 PIGWQ7Z7B1 504 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 HMGN2P46Q86SG4 172 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 CALHM3Q86XJ0 350 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 VRK2Q86Y07 508 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 PEX5LQ8IYB4 626 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 ZNF440Q8IYI8 595 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 ZNF295-AS1Q8N0V1 137 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 CLIP4Q8N3C7 705 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 ZNF614Q8N883 585 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 OR8J3Q8NGG0 315 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 OR10Q1Q8NGQ4 319 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 OR10D3Q8NH80 312 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 FNDC9Q8TBE3 224 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 TMEM234Q8WY98 164 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 LRRC58Q96CX6 371 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 STARD4Q96DR4 205 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 KLHL15Q96M94 604 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 GPATCH1Q9BRR8 931 aaKnown RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 SPATA9Q9BWV2 254 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 TRIM8Q9BZR9 551 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 MYLK2Q9H1R3 596 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 COQ10BQ9H8M1 238 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 RLIMQ9NVW2 624 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 ZNF443Q9Y2A4 671 aaPredicted RBP7.4□□□□□ -1.22
NEK3-209ENST00000618856 IFT52Q9Y366 437 aa7.4□□□□□ -1.22
NEK3-209ENST00000618856 HRNRQ86YZ3 2850 aaPredicted RBP7.39□□□□□ -1.23
NEK3-209ENST00000618856 ANKHD1Q8IWZ3 2542 aaKnown RBP7.39□□□□□ -1.23
NEK3-209ENST00000618856 GMNCA6NCL1 334 aa7.39□□□□□ -1.23
NEK3-209ENST00000618856 CFAP73A6NFT4 308 aa7.39□□□□□ -1.23
NEK3-209ENST00000618856 GJE1A6NN92 205 aa7.39□□□□□ -1.23
NEK3-209ENST00000618856 EVPLLA8MZ36 301 aa7.39□□□□□ -1.23
NEK3-209ENST00000618856 EIF1AYO14602 144 aaKnown RBP7.39□□□□□ -1.23
NEK3-209ENST00000618856 DVL2O14641 736 aa7.39□□□□□ -1.23
NEK3-209ENST00000618856 SEC14L5O43304 696 aa7.39□□□□□ -1.23
NEK3-209ENST00000618856 ZNF208O43345 1280 aa7.39□□□□□ -1.23
NEK3-209ENST00000618856 HNRNPRO43390 633 aaKnown RBP7.39□□□□□ -1.23
NEK3-209ENST00000618856 CCDC22O60826 627 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms