RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 PLA2G2CQ5R387 149 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 AADACL4Q5VUY2 407 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 BBS1Q8NFJ9 593 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 ZNF524Q96C55 264 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 POLR2J2Q9GZM3 115 aaKnown RBP16.1■□□□□ 0.17
CNOT3-209ENST00000617930 UBQLN3Q9H347 655 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 Q9N2J8 555 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 RXFP3Q9NSD7 469 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 CRNNQ9UBG3 495 aaPredicted RBP16.1■□□□□ 0.17
CNOT3-209ENST00000617930 ITGB1BP2Q9UKP3 347 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 CAB39Q9Y376 341 aaPredicted RBP16.1■□□□□ 0.17
CNOT3-209ENST00000617930 CDH10Q9Y6N8 788 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 ASCC3Q8N3C0 2202 aaKnown RBP16.1■□□□□ 0.17
CNOT3-209ENST00000617930 LNP1A1A4G5 178 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 KDM4EB2RXH2 506 aaPredicted RBP16.09■□□□□ 0.17
CNOT3-209ENST00000617930 DDAH2O95865 285 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 IFI30P13284 250 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 GALNSP34059 522 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 ARL4DP49703 201 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 ATP12AP54707 1039 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 SELENBP1Q13228 472 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 FHL1Q13642 323 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 SERTAD2Q14140 314 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 HSDL2Q6YN16 418 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 THSD4Q6ZMP0 1018 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 SHFQ7M4L6 423 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 SLC34A3Q8N130 599 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 CARFQ8N187 725 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 NANOGP1Q8N7R0 232 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 ANKK1Q8NFD2 765 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 OSTF1Q92882 214 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 EFHD2Q96C19 240 aaPredicted RBP16.09■□□□□ 0.17
CNOT3-209ENST00000617930 MESP1Q9BRJ9 268 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 ZNF426Q9BUY5 554 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 ZNF768Q9H5H4 540 aaKnown RBP16.09■□□□□ 0.17
CNOT3-209ENST00000617930 SLC22A11Q9NSA0 550 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 YKT6O15498 198 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 APOA1P02647 267 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 IGKV3-11P04433 115 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 ETV6P41212 452 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 SQSTM1Q13501 440 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 DSG2Q14126 1118 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 PGGHGQ32M88 737 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 MINDY4Q4G0A6 757 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 TMEM71Q6P5X7 295 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 ZNF613Q6PF04 617 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 APOOLQ6UXV4 268 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 PRSS58Q8IYP2 241 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 RNF113BQ8IZP6 322 aaKnown RBP16.09■□□□□ 0.17
CNOT3-209ENST00000617930 SLC38A9Q8NBW4 561 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 IFI44Q8TCB0 444 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 ZNF578Q96N58 590 aaPredicted RBP16.09■□□□□ 0.17
CNOT3-209ENST00000617930 KLHDC3Q9BQ90 382 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 OR52D1Q9H346 318 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 FGF21Q9NSA1 209 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 MRPS18AQ9NVS2 196 aaKnown RBP16.09■□□□□ 0.17
CNOT3-209ENST00000617930 QPCTLQ9NXS2 382 aa16.09■□□□□ 0.17
CNOT3-209ENST00000617930 UNC119BA6NIH7 251 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 WWP2O00308 870 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 PRODHO43272 600 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 GPX5O75715 221 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 SOX30O94993 753 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 SCG5P05408 212 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 SOX3P41225 446 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 RNLSQ5VYX0 342 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 KIRREL2Q6UWL6 708 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 LINC00114Q6XXX2 140 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 CCDC190Q86UF4 302 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 LSMEM1Q8N8F7 131 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 OR13C2Q8NGS9 318 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 BRIX1Q8TDN6 353 aaKnown RBP16.08■□□□□ 0.16
CNOT3-209ENST00000617930 ZNF721Q8TF20 911 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 ATOH1Q92858 354 aaPredicted RBP16.08■□□□□ 0.16
CNOT3-209ENST00000617930 BPIFA2Q96DR5 249 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 MVB12AQ96EY5 273 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 OR1F2PQ96R84 312 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 ZNF559Q9BR84 538 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 MND1Q9BWT6 205 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 RACGAP1Q9H0H5 632 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 NXF5Q9H1B4 397 aaKnown RBP16.08■□□□□ 0.16
CNOT3-209ENST00000617930 LRRN3Q9H3W5 708 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 SMURF1Q9HCE7 757 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 DIMT1Q9UNQ2 313 aaKnown RBP16.08■□□□□ 0.16
CNOT3-209ENST00000617930 RALGAPA1Q6GYQ0 2036 aa16.08■□□□□ 0.16
CNOT3-209ENST00000617930 IGHV5-10-1A0A0J9YXX1 117 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 BHLHE40O14503 412 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 OIP5O43482 229 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 GALR2O43603 387 aaPredicted RBP16.07■□□□□ 0.16
CNOT3-209ENST00000617930 GDF9O60383 454 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 MSL3P1P0C860 447 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 CD79BP40259 229 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 CD226Q15762 336 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.07■□□□□ 0.16
CNOT3-209ENST00000617930 KLHL26Q53HC5 615 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 QSOX2Q6ZRP7 698 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 TMPRSS11FQ6ZWK6 438 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 RABEPKQ7Z6M1 372 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 CLDN22Q8N7P3 220 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 SCAIQ8N9R8 606 aa16.07■□□□□ 0.16
CNOT3-209ENST00000617930 RNFT2Q96EX2 444 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms