RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 IGHV3-20A0A0C4DH32 117 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 CCRL2O00421 344 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 SCDO00767 359 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 REM1O75628 298 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 SCRG1O75711 98 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 BMXP51813 675 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 NR0B1P51843 470 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 TRIM61Q5EBN2 209 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 HLA-DQA1Q5Y7H0 255 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 ATCAYQ86WG3 371 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 CPOQ8IVL8 374 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 TMEM105Q8N8V8 129 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 PLPP5Q8NEB5 264 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 OR1N1Q8NGS0 311 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 IFT27Q9BW83 186 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 WWTR1Q9GZV5 400 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 PLGRKTQ9HBL7 147 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 FGF20Q9NP95 211 aaPredicted RBP15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 RARRES3Q9UL19 164 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 ASCC3Q8N3C0 2202 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 SOCS6O14544 535 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 ICOSLGO75144 302 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 PTP4A3O75365 173 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 SCG5P05408 212 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 UBL4AP11441 157 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 CCR4P51679 360 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 RPS3AP61247 264 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 COPZ1P61923 177 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 LPAL2Q16609 132 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 DGUOKQ16854 277 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 NKAIN1Q4KMZ8 207 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 C3orf38Q5JPI3 329 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 CBLN3Q6UW01 205 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 CXXC5Q7LFL8 322 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 ADCK1Q86TW2 530 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 OAFQ86UD1 273 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 SLITRK4Q8IW52 837 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 LNX2Q8N448 690 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 RFKQ969G6 155 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 TNFRSF13CQ96RJ3 184 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 CENPOQ9BU64 300 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 TGIF2Q9GZN2 237 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 MED20Q9H944 212 aa15.91■□□□□ 0.14
PCDHGC3-205ENST00000617641 HCN1O60741 890 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 MYL12AP19105 171 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 DAB2P98082 770 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 DBPQ10586 325 aaPredicted RBP15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 SKP2Q13309 424 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 PHF19Q5T6S3 580 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 NXNL2Q5VZ03 156 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 RPL13AP3Q6NVV1 102 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 PLBD1Q6P4A8 553 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 C19orf48Q6RUI8 117 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 ZNF440Q8IYI8 595 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 TMCO5AQ8N6Q1 288 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 C7orf57Q8NEG2 295 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 C3orf49Q96BT1 292 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 APMAPQ9HDC9 416 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 OSGIN1Q9UJX0 560 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 MRTO4Q9UKD2 239 aaKnown RBP15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 WDFY4Q6ZS81 3184 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 WDR87Q6ZQQ6 2873 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 ADH7P40394 386 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 OPRL1P41146 370 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 GPR143P51810 404 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 LIMK1P53667 647 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 DCAF7P61962 342 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 FHL1Q13642 323 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 FCRLBQ6BAA4 426 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 SLC29A4Q7RTT9 530 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 SLC15A4Q8N697 577 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 OR4F15Q8NGB8 312 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 DNAJA4Q8WW22 397 aaPredicted RBP15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 GTPBP2Q9BX10 602 aaKnown RBP15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 MCCC2Q9HCC0 563 aa15.9■□□□□ 0.14
PCDHGC3-205ENST00000617641 IGLV3-12A0A075B6K2 115 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 A0A087WUJ7 227 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 IRGMA1A4Y4 181 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 LRRN3E7EW58 273 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 GTPBP1O00178 669 aaKnown RBP15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 CER1O95813 267 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 IL12BP29460 328 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 FOXK2Q01167 660 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 C1DQ13901 141 aaKnown RBP15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 TMEM44Q2T9K0 475 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 OR2G6Q5TZ20 316 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 NACC2Q96BF6 587 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 KLHDC3Q9BQ90 382 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 RTN4RQ9BZR6 473 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 SLIRPQ9GZT3 109 aaKnown RBP15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 SMOC1Q9H4F8 434 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 OCIAD1Q9NX40 245 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 H2AFY2Q9P0M6 372 aaPredicted RBP15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 IDSB3KWA1 339 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 WWP2O00308 870 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 PPP1R3DO95685 299 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 HTR1FP30939 366 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 UGT2B10P36537 528 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 PLCXD2Q0VAA5 305 aa15.89■□□□□ 0.13
PCDHGC3-205ENST00000617641 B3GLCTQ6Y288 498 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms