RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 GCH1P30793 250 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 KIR2DL1P43626 348 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 PAQR7Q86WK9 346 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 ARMC10Q8N2F6 343 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TEX19Q8NA77 164 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 SDR9C7Q8NEX9 313 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF420Q8TAQ5 688 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 FNDC8Q8TC99 324 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 NT5CQ8TCD5 201 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 GATAD2BQ8WXI9 593 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 UCN3Q969E3 161 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 FBXO9Q9UK97 447 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TRAV36DV7A0A075B6V5 113 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 IGHV3-20A0A0C4DH32 117 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC35F4A4IF30 521 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 CLCA1A8K7I4 914 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 EIF1BO60739 113 aaKnown RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TSPAN12O95859 305 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 THBS2P35442 1172 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC26A5P58743 744 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF404Q494X3 552 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TMEM236Q5W0B7 351 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 FAM205BPQ63HN1 556 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 LAIR1Q6GTX8 287 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF704Q6ZNC4 412 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC22A16Q86VW1 577 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 NEDD4LQ96PU5 975 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 BARD1Q99728 777 aaKnown RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 SAP130Q9H0E3 1048 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF160Q9HCG1 818 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 PLEKHA6Q9Y2H5 1048 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 GRIP1Q9Y3R0 1128 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 CORINQ9Y5Q5 1042 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 NPFFR2Q9Y5X5 522 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TMED7-TICAM2A0A0A6YYA0 188 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 ARGFXA6NJG6 315 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TMPRSS11DO60235 418 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 FGF17O60258 216 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC19A2O60779 497 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 IL32P24001 234 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 MAP2K4P45985 399 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 PRKXP51817 358 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TSPAN31Q12999 210 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 STK11Q15831 433 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 PGGHGQ32M88 737 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 VWA2Q5GFL6 755 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 FCRLBQ6BAA4 426 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 CARFQ8N187 725 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF565Q8N9K5 539 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC16A11Q8NCK7 471 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 OR51L1Q8NGJ5 315 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 ZMYND19Q96E35 227 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC6A20Q9NP91 592 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 CLEC1BQ9P126 229 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 MEMO1Q9Y316 297 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TMED7Q9Y3B3 224 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 TTC3P53804 2025 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 NUP205Q92621 2012 aa8.77□□□□□ -1.01
CLTCL1-208ENST00000615606 hCG_1807616A0A1W2PRN6 198 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 G3V3Y1 287 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 MRPS14O60783 128 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 SORBS2O94875 1100 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 CD22P20273 847 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 HOXD12P35452 270 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 RAB39AQ14964 217 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF782Q6ZMW2 699 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 PRSS48Q7RTY5 328 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 TAMM41Q96BW9 452 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 BORCS8Q96FH0 119 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 DHRS1Q96LJ7 313 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 CITED4Q96RK1 184 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 NGBQ9NPG2 151 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 GPR83Q9NYM4 423 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 PLEK2Q9NYT0 353 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF639Q9UID6 485 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ABCG2Q9UNQ0 655 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 PMF1-BGLAPU3KQ54 211 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 GREB1LQ9C091 1923 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 TRAV27A0A087WT01 109 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 C12orf71A8MTZ7 269 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 H3BSA7 217 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 PCDH17O14917 1159 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 RAD51DO75771 328 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 MT-CO3P00414 261 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 PTHP01270 115 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 FKBP2P26885 142 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 TPTEP56180 551 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ANKDD1AQ495B1 522 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF613Q6PF04 617 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 MRPL21Q7Z2W9 205 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 IGFN1Q86VF2 1251 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 POLHQ9Y253 713 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 CMAHPQ9Y471 501 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC16A7O60669 478 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 CD160O95971 181 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 BMP1P13497 986 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 TMBIM6P55061 237 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 ZXDAP98168 799 aa8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 HNRNPA0Q13151 305 aaKnown RBP8.76□□□□□ -1.01
CLTCL1-208ENST00000615606 THOC7Q6I9Y2 204 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms