RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 GSAPA4D1B5 854 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 SNRNP200O75643 2136 aaKnown RBP12.15□□□□□ -0.47
FOXN3-219ENST00000615335 SSTR2P30874 369 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 C2orf80Q0P641 193 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 C17orf82Q86X59 251 aaPredicted RBP12.15□□□□□ -0.47
FOXN3-219ENST00000615335 OR2A1Q8NGT9 310 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 SCMH1Q96GD3 660 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 PRRX2Q99811 253 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 DNTTIP1Q9H147 329 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 PPP1R3EQ9H7J1 279 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 POLE3Q9NRF9 147 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 HRASLS2Q9NWW9 162 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 SLCO1C1Q9NYB5 712 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 LRIT1Q9P2V4 623 aa12.15□□□□□ -0.47
FOXN3-219ENST00000615335 HEATR5BQ9P2D3 2071 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 A0A0G2JPF8 293 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 RHPN2P1A8MT19 583 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 A8MVJ9 347 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 HNRNPCL3B7ZW38 293 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 HTR3BO95264 441 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 GBAP04062 536 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 HNRNPCL4P0DMR1 293 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 TYRP1P17643 537 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 GABRB1P18505 474 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 CRYBB2P43320 205 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 CAMK2DQ13557 499 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 PLA2G2CQ5R387 149 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 TRIM40Q6P9F5 258 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 C3P1Q6ZMU1 363 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 COMMD6Q7Z4G1 85 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 SLC35F3Q8IY50 421 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 PRSS33Q8NF86 280 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 SLC22A18Q96BI1 424 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 OTULINQ96BN8 352 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 PPCDCQ96CD2 204 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 PDCD10Q9BUL8 212 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 C1QTNF6Q9BXI9 259 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 HHATLQ9HCP6 504 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 PLEKHB1Q9UF11 243 aaPredicted RBP12.14□□□□□ -0.47
FOXN3-219ENST00000615335 ACSL6Q9UKU0 697 aa12.14□□□□□ -0.47
FOXN3-219ENST00000615335 RAB19A4D1S5 217 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 PMS2P1A4D2B8 440 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 PRAMEF25A6NGN4 478 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 CDRT1O95170 752 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 FURINP09958 794 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MYF5P13349 255 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 PEBP1P30086 187 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 CHI3L1P36222 383 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 RPL3P39023 403 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 CDK6Q00534 326 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MC1RQ01726 317 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 PRDX1Q06830 199 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 LGALS3BPQ08380 585 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 HNRNPA0Q13151 305 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 SLBPQ14493 270 aaKnown RBP eCLIP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 NXPE4Q6UWF7 544 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 KANSL1Q7Z3B3 1105 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 OR9Q2Q8NGE9 314 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 NANPQ8TBE9 248 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 GEMIN6Q8WXD5 167 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MED18Q9BUE0 208 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 TMEM38AQ9H6F2 299 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MRPS30Q9NP92 439 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 C1GALT1Q9NS00 363 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MAP4K5Q9Y4K4 846 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MEIKINA0A087WXM9 373 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 FAM221BA6H8Z2 402 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 H7BY64 318 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 J3KTA2 159 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 FOXE1O00358 373 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 SAP18O00422 153 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 CASC3O15234 703 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 PRICKLE3O43900 615 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 HPGDSO60760 199 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 UBXN7O94888 489 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 CBX7O95931 251 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 TGFB1P01137 390 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 C1GALT1C1LP0DN25 315 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 APEX1P27695 318 aaKnown RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 SLC6A1P30531 599 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MEF2AQ02078 507 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 KIR2DS3Q14952 304 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF630Q2M218 657 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MPEG1Q2M385 716 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 ZNF425Q6IV72 752 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 SHFQ7M4L6 423 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 ADCK2Q7Z695 626 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 OOSP2Q86WS3 158 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 STPG2Q8N412 459 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 EID2Q8N6I1 236 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 SUMF1Q8NBK3 374 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 OR4C6Q8NH72 309 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 C16orf78Q8WTQ4 265 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 PRAP1Q96NZ9 151 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 OR51M1Q9H341 326 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 PRDM9Q9NQV7 894 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 MS4A12Q9NXJ0 267 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 POMT2Q9UKY4 750 aa12.13□□□□□ -0.47
FOXN3-219ENST00000615335 LNP1A1A4G5 178 aa12.12□□□□□ -0.47
FOXN3-219ENST00000615335 NUDT21O43809 227 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms