RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 TUBG1P23258 451 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 VASNQ6EMK4 673 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF597Q96LX8 424 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 MICU1Q9BPX6 476 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 NOSIPQ9Y314 301 aaKnown RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 TMEM184BQ9Y519 407 aaPredicted RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF77Q15935 545 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 MRPL2Q5T653 305 aaKnown RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 TRNP1Q6NT89 227 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 PODNL1Q6PEZ8 512 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 FAM83HQ6ZRV2 1179 aaPredicted RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 FAM217AQ8IXS0 508 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 LILRB2Q8N423 598 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 LKAAEAR1Q8TD35 194 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ADAMTS19Q8TE59 1207 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 DUSP19Q8WTR2 217 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF578Q96N58 590 aaPredicted RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ST6GALNAC5Q9BVH7 336 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 VN1R3Q9BXE9 311 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 PSMB10P40306 273 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ATP1B3P54709 279 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 KIAA1024LP59773 190 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 FUNDC2Q9BWH2 189 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 MMACHCQ9Y4U1 282 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 KDM4EB2RXH2 506 aaPredicted RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 DDAH2O95865 285 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 KNG1P01042 644 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 GABRR1P24046 479 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 SLC6A19Q695T7 634 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 AAED1Q7RTV5 226 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 EGLN2Q96KS0 407 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 RANBP3Q9H6Z4 567 aaPredicted RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 THSD1Q9NS62 852 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 A8MV72 311 aaPredicted RBP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 H0YIV9 168 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ADH6P28332 368 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 ETV4P43268 484 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.85■□□□□ 0.61
CTDP1-208ENST00000613122 MMP17Q9ULZ9 603 aa18.85■□□□□ 0.61
CTDP1-208ENST00000613122 KLRC4-KLRK1H3BQV0 150 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF44P15621 663 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 ASRGL1Q7L266 308 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 EPHX3Q9H6B9 360 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 ERVK13-1Q9NX77 482 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 DENRO43583 198 aaKnown RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 EPHA1P21709 976 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 CXCR4P61073 352 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 HBA1P69905 142 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 VHLLQ6RSH7 139 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 CENPSQ8N2Z9 138 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 LRRC18Q8N456 261 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 IL17RDQ8NFM7 739 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 PIGCQ92535 297 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 PBX4Q9BYU1 374 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 POLE4Q9NR33 117 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 AK6Q9Y3D8 172 aaKnown RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 FAM155AB1AL88 458 aaPredicted RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 HHLA1C9JL84 531 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 CLDN17P56750 224 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 C3orf30Q96M34 536 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 FOXN4Q96NZ1 517 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 MRPS2Q9Y399 296 aaKnown RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 ATF4P18848 351 aaPredicted RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 GABRA2P47869 451 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 HTR5AP47898 357 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 GPLD1P80108 840 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 OR11L1Q8NGX0 322 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 LCORQ96JN0 433 aaPredicted RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 SLC30A3Q99726 388 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 DDX31Q9H8H2 851 aaKnown RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 GORASP2Q9H8Y8 452 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 HHLA2Q9UM44 414 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 TRAPPC2LH3BP13 241 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 AGTR1P30556 359 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 SLC35A1P78382 337 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 PCGF3Q3KNV8 242 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 GARNL3Q5VVW2 1013 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF322Q6U7Q0 402 aaPredicted RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 C5orf46Q6UWT4 87 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 FAM160A2Q8N612 972 aaPredicted RBP18.84■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF696Q9H7X3 374 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 ZFP57Q9NU63 452 aa18.84■□□□□ 0.61
CTDP1-208ENST00000613122 SERPINE2P07093 398 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 BCL7AQ4VC05 210 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 NIPAL3Q6P499 406 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 PIGQQ9BRB3 760 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 CACNG6Q9BXT2 260 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 FOLH1BQ9HBA9 442 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 G3V3Y1 287 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 I3L521 148 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 GYPBP06028 91 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 RAB40BQ12829 278 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 NKPD1Q17RQ9 610 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 SLC5A12Q1EHB4 618 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 SLC22A10Q63ZE4 541 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 ZNF566Q969W8 418 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 MRI1Q9BV20 369 aa18.83■□□□□ 0.61
CTDP1-208ENST00000613122 TMEM269A0A1B0GVZ9 245 aa18.83■□□□□ 0.6
CTDP1-208ENST00000613122 SSX5O60225 188 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms