RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 SFRP5Q5T4F7 317 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 IL23RQ5VWK5 629 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 EPGNQ6UW88 154 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PLCZ1Q86YW0 608 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 GALNT12Q8IXK2 581 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PRR22Q8IZ63 422 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 GABRG1Q8N1C3 465 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ZNF619Q8N2I2 560 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 OR7G1Q8NGA0 311 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CEP70Q8NHQ1 597 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ZNF675Q8TD23 568 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 RIT1Q92963 219 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 KLHL29Q96CT2 875 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ZNF681Q96N22 645 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 JMJD8Q96S16 334 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CCDC28BQ9BUN5 200 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 OSBPL11Q9BXB4 747 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 EBPLQ9BY08 206 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 BPESC1Q9GZL8 116 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 REEP4Q9H6H4 257 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 UNKLQ9H9P5 680 aaKnown RBP6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SLC35C2Q9NQQ7 365 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ATAD3AQ9NVI7 634 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 TMEM45AQ9NWC5 275 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 FBXO34Q9NWN3 711 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CLEC4AQ9UMR7 237 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CFL2Q9Y281 166 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 EMC9Q9Y3B6 208 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 USH1CQ9Y6N9 552 aa6.33□□□□□ -1.4
PTCHD3P1-201ENST00000612350 LOC390937A0A1W2PQ73 354 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 GLOD5A6NK44 160 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 MYO1GB0I1T2 1018 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SDHDO14521 159 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ZNF195O14628 629 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ABCD4O14678 606 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 EDF1O60869 148 aaKnown RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SHOX2O60902 331 aaPredicted RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PRKRAO75569 313 aaKnown RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ERAL1O75616 437 aaKnown RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PPM1BO75688 479 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 JUNP05412 331 aaKnown RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 TACSTD2P09758 323 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 G6PDP11413 515 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 IDO1P14902 403 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 NAGAP17050 411 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 TCEA1P23193 301 aaKnown RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 EPHA3P29320 983 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 NTSP30990 170 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SSTR4P31391 388 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 FRKP42685 505 aaPredicted RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 MRPL19P49406 292 aaKnown RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CLNS1AP54105 237 aaKnown RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CLDN20P56880 219 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PSPHP78330 225 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 LRRC74AQ0VAA2 488 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 MAP4K2Q12851 820 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PDE7AQ13946 482 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 MLC1Q15049 377 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 B3GLCTQ6Y288 498 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 NUP54Q7Z3B4 507 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 FBXL14Q8N1E6 418 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SVOPLQ8N434 492 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 METTL25Q8N6Q8 603 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 GLB1L3Q8NCI6 653 aaPredicted RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ZFP28Q8NHY6 868 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 TESCQ96BS2 214 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PPCDCQ96CD2 204 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 GMPPAQ96IJ6 420 aaPredicted RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 EGLN2Q96KS0 407 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 TSSK3Q96PN8 268 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 BRINP2Q9C0B6 783 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SLITRK2Q9H156 845 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CXorf21Q9HAI6 301 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SLCO1B3Q9NPD5 702 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ACSS1Q9NUB1 689 aaPredicted RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 MARCOQ9UEW3 520 aaPredicted RBP6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ATP6V1HQ9UI12 483 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 ZNF337Q9Y3M9 751 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SPEF1Q9Y4P9 236 aa6.32□□□□□ -1.4
PTCHD3P1-201ENST00000612350 HEATR1Q9H583 2144 aaKnown RBP6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 A0A087WV62 115 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 LOC100653049A0A140TA62 436 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 TTC36A6NLP5 189 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 POM121CA8CG34 1229 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SCAMP2O15127 329 aaKnown RBP6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 UBDO15205 165 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 POLR3GO15318 223 aaPredicted RBP6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PLOD3O60568 738 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 KRT34O76011 436 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 TROVE2P10155 538 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 NT5EP21589 574 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PCMT1P22061 227 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 FEN1P39748 380 aaKnown RBP6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 AQP5P55064 265 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CTBP2P56545 445 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 NRG3P56975 720 aa6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 UBA52P62987 128 aaKnown RBP6.31□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SCGB2A2Q13296 93 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms