RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 OR7D2Q96RA2 312 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 TRMOQ9BU70 441 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 TRAF4Q9BUZ4 470 aaPredicted RBP11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 MECRQ9BV79 373 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 CACNG6Q9BXT2 260 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 HOXD1Q9GZZ0 328 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 BARX1Q9HBU1 254 aaPredicted RBP11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 GP6Q9HCN6 339 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 FAIMQ9NVQ4 179 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 NPAP1Q9NZP6 1156 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 DTNAQ9Y4J8 743 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 TRAF6Q9Y4K3 522 aa11.82□□□□□ -0.52
HMGB1P24-201ENST00000611897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 IGHV4-30-2A0A087WSY4 118 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 CENPVL1A0A0U1RR11 272 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 A0A1W2PR80 420 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 CIB4A0PJX0 185 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 TLDC2A0PJX2 215 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 CCT8L1PA6NM43 557 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 SHISA9B4DS77 424 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 TLX2O43763 284 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 SLU7O95391 586 aaKnown RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 IFNA2P01563 188 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 UBTFL6P0CB48 400 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 GGT1P19440 569 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 IGHV1-2P23083 117 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 ZNF83P51522 516 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 CASP9P55211 416 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 RAC3P60763 192 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 SPOCK1Q08629 439 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 MERTKQ12866 999 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 CBFBQ13951 182 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 CHRFAM7AQ494W8 412 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 ARL13AQ5H913 290 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 EXOSC6Q5RKV6 272 aaKnown RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 SLC22A25Q6T423 547 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 LSRQ86X29 649 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 CLEC4FQ8N1N0 589 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 FNDC5Q8NAU1 212 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 OR52N5Q8NH56 324 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 ARL8AQ96BM9 186 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 RHNO1Q9BSD3 238 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 THUMPD3Q9BV44 507 aaKnown RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 L2HGDHQ9H9P8 463 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 ATAD3AQ9NVI7 634 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 GPATCH2Q9NW75 528 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 ING1Q9UK53 422 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 ACTL7BQ9Y614 415 aa11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 ANK3Q12955 4377 aaKnown RBP11.81□□□□□ -0.52
HMGB1P24-201ENST00000611897 SERINC4A6NH21 518 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 A8MV72 311 aaPredicted RBP11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 SULT2B1O00204 365 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 GPRIN2O60269 458 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 CSTAP01040 98 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 CD8AP01732 235 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 ALDH3A1P30838 453 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 MLC1Q15049 377 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 PGS1Q32NB8 556 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 LSM12Q3MHD2 195 aaKnown RBP11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 AGAP6Q5VW22 663 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 IL23RQ5VWK5 629 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 PODNL1Q6PEZ8 512 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 CLEC2AQ6UVW9 174 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 C16orf62Q7Z3J2 963 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 GALNT5Q7Z7M9 940 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 HMGN2P46Q86SG4 172 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 PHC2Q8IXK0 858 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 CNPY4Q8N129 248 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 KIF18AQ8NI77 898 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 SFXN5Q8TD22 340 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 APOPT1Q96IL0 206 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 SLC35G5Q96KT7 338 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 ADAD1Q96M93 576 aaKnown RBP11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 C1QTNF6Q9BXI9 259 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 BCO1Q9HAY6 547 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 EML4Q9HC35 981 aaKnown RBP11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 SERINC1Q9NRX5 453 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 B3GALT5Q9Y2C3 310 aa11.8□□□□□ -0.52
HMGB1P24-201ENST00000611897 RNF103-CHMP3A0A140T963 221 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 FAM234BA2RU67 622 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 NPIPB9F8W1W9 429 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 M0R1B8 84 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 EIF4E2O60573 245 aaKnown RBP11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 CYTIPO60759 359 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 SPAG7O75391 227 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 CCNA2P20248 432 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 RYKP34925 604 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 DIO1P49895 249 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 SESN3P58005 492 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 SKP2Q13309 424 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 NRF1Q16656 503 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 SYT14P1Q58G82 188 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 TIMM23BQ5SRD1 257 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 C9orf135Q5VTT2 229 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 RNF165Q6ZSG1 346 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 DTX2Q86UW9 622 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 CLECL1Q8IZS7 167 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 FBXL14Q8N1E6 418 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 ZNF563Q8TA94 476 aa11.79□□□□□ -0.52
HMGB1P24-201ENST00000611897 TUBGCP3Q96CW5 907 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms