RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 PRSS53Q2L4Q9 553 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ALG11Q2TAA5 492 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 TMEM201Q5SNT2 666 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ULK3Q6PHR2 472 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ZNF782Q6ZMW2 699 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 SERPINA12Q8IW75 414 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 TMEM99Q8N816 258 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 OR6C4Q8NGE1 309 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 SNAPC3Q92966 411 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 COX14Q96I36 57 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 NARS2Q96I59 477 aaKnown RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 SLC25A18Q9H1K4 315 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 MGAT4AQ9UM21 535 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 A0A0G2JMP0 313 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 A0A0X1KG70 313 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 CDHR4A6H8M9 788 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 B4DXG7 233 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 SURF4O15260 269 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 NDUFB5O43674 189 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 LILRB5O75023 590 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 THEGLP0DJG4 465 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 NID1P14543 1247 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 SNRPBP14678 240 aaKnown RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 MTNR1BP49286 362 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 SFXN4Q6P4A7 337 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 CRIPAKQ8N1N5 446 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 CHST4Q8NCG5 386 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 TSTD1Q8NFU3 115 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 OR4M2Q8NGB6 313 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 CNOT9Q92600 299 aaKnown RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 ZNF707Q96C28 371 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 NECTIN4Q96NY8 510 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 TGM7Q96PF1 710 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ZNF717Q9BY31 904 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 TTYH1Q9H313 450 aaPredicted RBP8.07□□□□□ -1.12
LIG4-204ENST00000611712 KLHL21Q9UJP4 597 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 ERVK-19Q9WJR5 959 aa8.07□□□□□ -1.12
LIG4-204ENST00000611712 FAM25EA8MYX2 175 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 FZD7O75084 574 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 ARSBP15848 533 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 HOXB9P17482 250 aaPredicted RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 LCN1P31025 176 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 GNALP38405 381 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 TSPAN5P62079 268 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 HTRA4P83105 476 aaPredicted RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 MLF2Q15773 248 aaPredicted RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 FAM205BPQ63HN1 556 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 FAAH2Q6GMR7 532 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 HDDC2Q7Z4H3 204 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 UBE3DQ7Z6J8 389 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 TPRA1Q86W33 373 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 BEST4Q8NFU0 473 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 LRRC20Q8TCA0 184 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 TEAD3Q99594 435 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 GALNT9Q9HCQ5 603 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 OTOL1A6NHN0 477 aaPredicted RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 SLC9B1P1A6NJY1 282 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 PRAMEF2O60811 474 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 PRKCAP17252 672 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 GABRB1P18505 474 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 TRHRP34981 398 aaPredicted RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 DRD3P35462 400 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 ADH7P40394 386 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 CDK10Q15131 360 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 C4orf46Q504U0 113 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 PARM1Q6UWI2 310 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 RPTNQ6XPR3 784 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 ZNF627Q7L945 461 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 KRT77Q7Z794 578 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 ATCAYQ86WG3 371 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 ZNF227Q86WZ6 799 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 OR4M1Q8NGD0 313 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 DNAJA4Q8WW22 397 aaPredicted RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 KCTD12Q96CX2 325 aaKnown RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 OR10A4Q9H209 315 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 ISYNA1Q9NPH2 558 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 CENPMQ9NSP4 180 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 QPCTLQ9NXS2 382 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 OBP2AQ9NY56 170 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 COPZ2Q9P299 210 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 TRAPPC4Q9Y296 219 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 MAU2Q9Y6X3 613 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 A0A1W2PS29 197 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 TRIM64BA6NI03 449 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 MAS1P04201 325 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 LIMS3P0CW19 117 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 LIMS4P0CW20 117 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 AGERQ15109 404 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 P2RY14Q15391 338 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 ARHGAP11BQ3KRB8 267 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 SLC22A10Q63ZE4 541 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 TSEN54Q7Z6J9 526 aaKnown RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 MCATQ8IVS2 390 aaKnown RBP8.06□□□□□ -1.12
LIG4-204ENST00000611712 OR5M3Q8NGP4 307 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 OR4Q3Q8NH05 313 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 C15orf40Q8WUR7 153 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 PATE1Q8WXA2 126 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 TAPBPLQ9BX59 468 aa8.06□□□□□ -1.12
LIG4-204ENST00000611712 ACTR6Q9GZN1 396 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms