RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 MAU2Q9Y6X3 613 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TDRD15B5MCY1 1934 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 A0A0A6YYC8 382 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 H0Y8X5 98 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 I3L1I5 382 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 EIF1AYO14602 144 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 NPC1O15118 1278 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 NUPL2O15504 423 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 PRKNO60260 465 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 KRT33AO76009 404 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 NDUFB2O95178 105 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 RENP00797 406 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ALDOBP05062 364 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 CD2P06729 351 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 TRHRP34981 398 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ARFIP1P53367 373 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 GFOD2Q3B7J2 385 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 HBMQ6B0K9 141 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 RPL13AP3Q6NVV1 102 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 FCRLAQ7L513 359 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 TSEN54Q7Z6J9 526 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 OR52R1Q8NGF1 315 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 OR8D4Q8NGM9 314 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 OR2L8Q8NGY9 312 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 OR4Q3Q8NH05 313 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 RIT1Q92963 219 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ST6GAL2Q96JF0 529 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 TOX2Q96NM4 488 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 OR14A2Q96R54 314 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ARHGAP9Q9BRR9 750 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 GTPBP2Q9BX10 602 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 MKRN2Q9H000 416 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC38A1Q9H2H9 487 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 C6orf106Q9H6K1 298 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 METTL17Q9H7H0 456 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 FGF22Q9HCT0 170 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SIRT3Q9NTG7 399 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ICKQ9UPZ9 632 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 PRELID1Q9Y255 219 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 PDCD11Q14690 1871 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 NYNRINQ9P2P1 1898 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 POM121CA8CG34 1229 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SYT5O00445 386 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SCDO00767 359 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 HCRTR2O43614 444 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 RBBP9O75884 186 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 IFNA6P05013 189 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SYPP08247 313 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 GTF2F2P13984 249 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 CXCR1P25024 350 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 EVI2BP34910 448 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 GUCA1AP43080 201 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 CTXN1P60606 82 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ADAM8P78325 824 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SNTA1Q13424 505 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF79Q15937 498 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 DECR1Q16698 335 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 OLFML2AQ68BL7 652 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ADAMTSL4Q6UY14 1074 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC35F2Q8IXU6 374 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 LINC01555Q8NAE3 123 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SPPL3Q8TCT6 385 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 GIMAP1Q8WWP7 306 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 CNOT9Q92600 299 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 GCDHQ92947 438 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 TMEM43Q9BTV4 400 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 BTBD2Q9BX70 525 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 C12orf4Q9NQ89 552 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 PRTFDC1Q9NRG1 225 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 C14orf105Q9NVL8 296 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ACTR10Q9NZ32 417 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 APOBEC3BQ9UH17 382 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 FBXL3Q9UKT7 428 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 BAIAP2Q9UQB8 552 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SCN3AQ9NY46 2000 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SCN10AQ9Y5Y9 1956 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ARRDC5A6NEK1 342 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 C2orf74A8MZ97 194 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 H0YGG7 62 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 NRG2O14511 850 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ARPC5O15511 151 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC43A1O75387 559 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 TFP02787 698 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 HRGP04196 525 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 TCRBP04435 133 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SPARCP09486 303 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 IL12BP29460 328 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 RFX2P48378 723 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 GZMKP49863 264 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ARF3P61204 181 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 E2F1Q01094 437 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 DEFA5Q01523 94 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 SQSTM1Q13501 440 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 TRAM1Q15629 374 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF362Q5T0B9 420 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 LILRA6Q6PI73 481 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF836Q6ZNA1 936 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF550Q7Z398 422 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 COMMD7Q86VX2 200 aa6.38□□□□□ -1.39
SYNPO2-206ENST00000610556 PAQR7Q86WK9 346 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms