RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 SIGLEC12Q96PQ1 595 aa10.54□□□□□ -0.72
CTCFL-221ENST00000608903 CCDC86Q9H6F5 360 aaKnown RBP10.54□□□□□ -0.72
CTCFL-221ENST00000608903 HPF1Q9NWY4 346 aa10.54□□□□□ -0.72
CTCFL-221ENST00000608903 GPR83Q9NYM4 423 aa10.54□□□□□ -0.72
CTCFL-221ENST00000608903 USE1Q9NZ43 259 aa10.54□□□□□ -0.72
CTCFL-221ENST00000608903 MED11Q9P086 117 aa10.54□□□□□ -0.72
CTCFL-221ENST00000608903 FAM32AQ9Y421 112 aaKnown RBP10.54□□□□□ -0.72
CTCFL-221ENST00000608903 KCNMB2Q9Y691 235 aa10.54□□□□□ -0.72
CTCFL-221ENST00000608903 A0A1B0GWA3 101 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 TAF4O00268 1085 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 HCRTR2O43614 444 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 MITFO75030 526 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-221ENST00000608903 NEURL1O76050 574 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 GADD45GO95257 159 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 H1F0P07305 194 aaKnown RBP10.53□□□□□ -0.72
CTCFL-221ENST00000608903 ELAVL4P26378 380 aaKnown RBP10.53□□□□□ -0.72
CTCFL-221ENST00000608903 ITPKBP27987 946 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 DNAJA1P31689 397 aaKnown RBP10.53□□□□□ -0.72
CTCFL-221ENST00000608903 POLR2IP36954 125 aaKnown RBP10.53□□□□□ -0.72
CTCFL-221ENST00000608903 TMED10P49755 219 aaKnown RBP10.53□□□□□ -0.72
CTCFL-221ENST00000608903 TAS2R41P59536 307 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 TUBA3CQ13748 450 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 KCTD21Q4G0X4 260 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 TUBA3EQ6PEY2 450 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 SHQ1Q6PI26 577 aaKnown RBP10.53□□□□□ -0.72
CTCFL-221ENST00000608903 CYP4Z1Q86W10 505 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 WDSUB1Q8N9V3 476 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 FDCSPQ8NFU4 85 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 SLC7A13Q8TCU3 470 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 SLC39A7Q92504 469 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 SLC35B4Q969S0 331 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 PPP1R14BQ96C90 147 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 SLC41A3Q96GZ6 507 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 FRMD6Q96NE9 622 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 EPYCQ99645 322 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 ANGPTL4Q9BY76 406 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 HES7Q9BYE0 225 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 METTL7AQ9H8H3 244 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 REEP1Q9H902 201 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 EXOSC3Q9NQT5 275 aaKnown RBP10.53□□□□□ -0.72
CTCFL-221ENST00000608903 DEPPQ9NTK1 212 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 FAM118AQ9NWS6 357 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 LOC400499M0QZD8 3231 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 NCOR2Q9Y618 2525 aa10.53□□□□□ -0.72
CTCFL-221ENST00000608903 PINLYPA6NC86 204 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 C1QTNF9BB2RNN3 333 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 FMO6PO60774 539 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 E2F6O75461 281 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 C1QTNF9P0C862 333 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 FPR1P21462 350 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 ELK4P28324 431 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 IDH2P48735 452 aaKnown RBP10.52□□□□□ -0.72
CTCFL-221ENST00000608903 RRADP55042 308 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 COL28A1Q2UY09 1125 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 COLEC12Q5KU26 742 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 ABHD17BQ5VST6 288 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 SLC22A10Q63ZE4 541 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 ZNF770Q6IQ21 691 aaPredicted RBP10.52□□□□□ -0.72
CTCFL-221ENST00000608903 PODNL1Q6PEZ8 512 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 PLEKHM3Q6ZWE6 761 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 ZNF550Q7Z398 422 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 MEX3DQ86XN8 651 aaKnown RBP10.52□□□□□ -0.72
CTCFL-221ENST00000608903 LSMEM1Q8N8F7 131 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 OR9Q2Q8NGE9 314 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 GPR119Q8TDV5 335 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 SDCCAG3Q96C92 435 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 ALPK1Q96QP1 1244 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 RBM4BQ9BQ04 359 aaKnown RBP10.52□□□□□ -0.72
CTCFL-221ENST00000608903 FNDC11Q9BVV2 318 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 RBM4Q9BWF3 364 aaKnown RBP10.52□□□□□ -0.72
CTCFL-221ENST00000608903 ARMC7Q9H6L4 198 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 CHCHD3Q9NX63 227 aaKnown RBP10.52□□□□□ -0.72
CTCFL-221ENST00000608903 KLRF1Q9NZS2 232 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 PDP1Q9P0J1 537 aaPredicted RBP10.52□□□□□ -0.72
CTCFL-221ENST00000608903 TESQ9UGI8 421 aaKnown RBP10.52□□□□□ -0.72
CTCFL-221ENST00000608903 FBXL2Q9UKC9 423 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 SLC7A7Q9UM01 511 aa10.52□□□□□ -0.72
CTCFL-221ENST00000608903 A0A087WUU8 490 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 IGLV3-32A0A0A0MS00 114 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 A0A0B4J2E0 115 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 A0A1B0GX12 115 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 A0A1W2PRQ8 180 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 MED19A0JLT2 244 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-221ENST00000608903 TP53I11O14683 189 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 ADAMDEC1O15204 470 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 EIF4E2O60573 245 aaKnown RBP10.52□□□□□ -0.73
CTCFL-221ENST00000608903 PFDN1O60925 122 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 OR5F1O95221 314 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 DAPP51397 102 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 CCR4P51679 360 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 FOXK1P85037 733 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 TLE3Q04726 772 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 DGCR6Q14129 220 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 ZSWIM7Q19AV6 140 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 TMEM81Q6P7N7 255 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 RTL4Q6ZR62 310 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 RANBP3LQ86VV4 465 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-221ENST00000608903 CYP4Z2PQ8N1L4 340 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 CADM2Q8N3J6 435 aa10.52□□□□□ -0.73
CTCFL-221ENST00000608903 OR5W2Q8NH69 310 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms