RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 POC1B-GALNT4F8VUJ3 575 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 SLCO1B7G3V0H7 640 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 ETV2O00321 342 aaPredicted RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 PPP6CO00743 305 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 GMFGO60234 142 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 CYTIPO60759 359 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 SEC22BO75396 215 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 LYZL6O75951 148 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 AGR2O95994 175 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 WNT11O96014 354 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 CD8AP01732 235 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 UROSP10746 265 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 CHN1P15882 459 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 PRKCAP17252 672 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 APOBEC3AP31941 199 aaPredicted RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 HPCAL1P37235 193 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 FABP6P51161 128 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 MAP2K6P52564 334 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 ATP12AP54707 1039 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 C21orf58P58505 322 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 SNRPD2P62316 118 aaKnown RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 MRPS25P82663 173 aaKnown RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 C2orf54Q08AI8 447 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 FOXF1Q12946 379 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 MLC1Q15049 377 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 LSM12Q3MHD2 195 aaKnown RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 FBXW9Q5XUX1 488 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 KLHL24Q6TFL4 600 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 APOOLQ6UXV4 268 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 NUFIP2Q7Z417 695 aaKnown RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 ABHD12BQ7Z5M8 362 aaPredicted RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 ZNF619Q8N2I2 560 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 UBE2J2Q8N2K1 259 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 TEX29Q8N6K0 151 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 C1orf162Q8NEQ5 155 aaPredicted RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 OR5W2Q8NH69 310 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 OR2W6PQ8NHA6 318 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 FBXO27Q8NI29 283 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 PIGXQ8TBF5 258 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 PIK3R3Q92569 461 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 APH1AQ96BI3 265 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 ZMYND19Q96E35 227 aaPredicted RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 CHMP6Q96FZ7 201 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 PKNOX2Q96KN3 472 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 TMEM237Q96Q45 408 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 PRPF18Q99633 342 aaKnown RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 PSD2Q9BQI7 771 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 TRMOQ9BU70 441 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 RTN4RQ9BZR6 473 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 PIGUQ9H490 435 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 REEP4Q9H6H4 257 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 ZCCHC3Q9NUD5 404 aaKnown RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 ZDHHC18Q9NUE0 388 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 C1orf109Q9NX04 203 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 TAS2R16Q9NYV7 291 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 FLRT3Q9NZU0 649 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 MALT1Q9UDY8 824 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 GDF2Q9UK05 429 aaPredicted RBP5.56□□□□□ -1.52
CUX1-220ENST00000607092 AMDHD2Q9Y303 409 aa5.56□□□□□ -1.52
CUX1-220ENST00000607092 TGP01266 2768 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 IGKV3D-15A0A087WSY6 115 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 A0A096LNT2 108 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 LOC390937A0A1W2PQ73 354 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 OR6C65A6NJZ3 312 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 C17orf51A8MQB3 221 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 ZNF814B7Z6K7 855 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 SULT2B1O00204 365 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 ZNF264O43296 627 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 TCF21O43680 179 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 EIF1BO60739 113 aaKnown RBP5.55□□□□□ -1.52
CUX1-220ENST00000607092 MRPL33O75394 65 aaKnown RBP5.55□□□□□ -1.52
CUX1-220ENST00000607092 NME6O75414 186 aaPredicted RBP5.55□□□□□ -1.52
CUX1-220ENST00000607092 IGKV1D-16P01601 117 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 OPN1LWP04000 364 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 ABHD2P08910 425 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 SBK3P0C264 359 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 IGHV4-31P0DP07 118 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 MYL2P10916 166 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 UBL4AP11441 157 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 PGCP20142 388 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 CD40P25942 277 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 APOBEC1P41238 236 aaKnown RBP5.55□□□□□ -1.52
CUX1-220ENST00000607092 FRKP42685 505 aaPredicted RBP5.55□□□□□ -1.52
CUX1-220ENST00000607092 MAGEA8P43361 318 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 HTR3AP46098 478 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 CCT5P48643 541 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 HTR6P50406 440 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 WDR4P57081 412 aaKnown RBP5.55□□□□□ -1.52
CUX1-220ENST00000607092 PHC1P78364 1004 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 ZNF117Q03924 483 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 DUSP5Q16690 384 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 KRTAP24-1Q3LI83 254 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 CCDC153Q494R4 210 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 SPDYE7PQ495Y7 208 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 KLHL26Q53HC5 615 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 C11orf71Q6IPW1 123 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 CDC73Q6P1J9 531 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 RNF165Q6ZSG1 346 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 TMPPEQ6ZT21 453 aa5.55□□□□□ -1.52
CUX1-220ENST00000607092 ZNF551Q7Z340 670 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms