RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 DSTNP60981 165 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 SYPL1Q16563 259 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 CNEP1R1Q8N9A8 125 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 RFWD2Q8NHY2 731 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 VPS33AQ96AX1 596 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 SPDL1Q96EA4 605 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 NPAS1Q99742 590 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 PAIP1Q9H074 479 aaKnown RBP21.28■■□□□ 1
SSX2IP-209ENST00000603677 ARMC7Q9H6L4 198 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 CORO2BQ9UQ03 480 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 PCDHB14Q9Y5E9 798 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 DSPPQ9NZW4 1301 aa21.28■■□□□ 1
SSX2IP-209ENST00000603677 A0A0G2JPF8 293 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 HNRNPCL2B2RXH8 293 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 HNRNPCL3B7ZW38 293 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 TNFSF11O14788 317 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 EFNA2O43921 213 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 CXCL13O43927 109 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 HNRNPCL1O60812 293 aaKnown RBP21.27■■□□□ 1
SSX2IP-209ENST00000603677 PLGP00747 810 aaPredicted RBP21.27■■□□□ 1
SSX2IP-209ENST00000603677 CGAP01215 116 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 TFPTP0C1Z6 253 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 HNRNPCL4P0DMR1 293 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 NID1P14543 1247 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 CTBP2P56545 445 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 SESN3P58005 492 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 TOMM34Q15785 309 aaPredicted RBP21.27■■□□□ 1
SSX2IP-209ENST00000603677 COX20Q5RI15 118 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 GRINAQ7Z429 371 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 LUZP2Q86TE4 346 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 FUNDC1Q8IVP5 155 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 ANKFN1Q8N957 763 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 WDR60Q8WVS4 1066 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 CACYBPQ9HB71 228 aaKnown RBP21.27■■□□□ 1
SSX2IP-209ENST00000603677 SLC6A13Q9NSD5 602 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 GALNT8Q9NY28 637 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 CRIM1Q9NZV1 1036 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 CCDC167Q9P0B6 97 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 PROCRQ9UNN8 238 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 ZNF232Q9UNY5 417 aa21.27■■□□□ 1
SSX2IP-209ENST00000603677 A0A1W2PP18 115 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 CLIC1O00299 241 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 CTAG2O75638 210 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 AQP8O94778 261 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 THBS1P07996 1170 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 CHRM4P08173 479 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 SLC7A1P30825 629 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 RGNQ15493 299 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 ZNF239Q16600 458 aaKnown RBP21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 TMEM176BQ3YBM2 270 aaPredicted RBP21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 BTLAQ7Z6A9 289 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 ZNF563Q8TA94 476 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 SLC35B4Q969S0 331 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 ZG16BQ96DA0 208 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 KLHDC3Q9BQ90 382 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 BCL2L10Q9HD36 194 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 IFT52Q9Y366 437 aa21.26■□□□□ 0.99
SSX2IP-209ENST00000603677 MPDZO75970 2070 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 CENPVL1A0A0U1RR11 272 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 A6NNC1 897 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 DNPH1O43598 174 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 CYP7B1O75881 506 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 HOXB9P17482 250 aaPredicted RBP21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 SFTPDP35247 375 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 CD79BP40259 229 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 CSNK2A1P68400 391 aaPredicted RBP21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 LARS2Q15031 903 aaKnown RBP21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 NDUFAF6Q330K2 333 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 LIN52Q52LA3 116 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 HSP90B2PQ58FF3 399 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 VWA1Q6PCB0 445 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 PLXDC2Q6UX71 529 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 PLEKHM3Q6ZWE6 761 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 PNPT1Q8TCS8 783 aaKnown RBP21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 RNF128Q8TEB7 428 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 SLC38A5Q8WUX1 472 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 MED4Q9NPJ6 270 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 SLC52A3Q9NQ40 469 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 PDZD2O15018 2839 aa21.25■□□□□ 0.99
SSX2IP-209ENST00000603677 ATP8B1O43520 1251 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 SMNDC1O75940 238 aaKnown RBP eCLIP21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 PRKD3O94806 890 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 ETFAP13804 333 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 RNF220Q5VTB9 566 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 DNAJC14Q6Y2X3 702 aaPredicted RBP21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 STK32CQ86UX6 486 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 ZZZ3Q8IYH5 903 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 CCDC106Q9BWC9 280 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 TMEM185BQ9H7F4 350 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 A4GALTQ9NPC4 353 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 RASSF1Q9NS23 344 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 HDGFL3Q9Y3E1 203 aa21.24■□□□□ 0.99
SSX2IP-209ENST00000603677 ANKRD17O75179 2603 aaKnown RBP21.23■□□□□ 0.99
SSX2IP-209ENST00000603677 UQCRHLA0A096LP55 91 aa21.23■□□□□ 0.99
SSX2IP-209ENST00000603677 MERTKQ12866 999 aa21.23■□□□□ 0.99
SSX2IP-209ENST00000603677 MAPK11Q15759 364 aa21.23■□□□□ 0.99
SSX2IP-209ENST00000603677 AGKQ53H12 422 aa21.23■□□□□ 0.99
SSX2IP-209ENST00000603677 SLC2A7Q6PXP3 512 aa21.23■□□□□ 0.99
SSX2IP-209ENST00000603677 BEND4Q6ZU67 534 aa21.23■□□□□ 0.99
SSX2IP-209ENST00000603677 TMEM200AQ86VY9 491 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms