RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 NIPSNAP1Q9BPW8 284 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ALKBH7Q9BT30 221 aaPredicted RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 OR10A4Q9H209 315 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM260Q9NX78 707 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 HACL1Q9UJ83 578 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 LEF1Q9UJU2 399 aaPredicted RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SAMD4AQ9UPU9 718 aaKnown RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 CITO14578 2027 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 C9J4A7 227 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 APOC4-APOC2K7ER74 178 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 UBFD1O14562 309 aaKnown RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PIP5K1BO14986 540 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 FGF16O43320 207 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 RHBDL1O75783 438 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 YIF1AO95070 293 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PTHP01270 115 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 IGHEP01854 428 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 ANXA2P07355 339 aaKnown RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 C1SP09871 688 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CD58P19256 250 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 TYMPP19971 482 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PTNP21246 168 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 GLRA1P23415 457 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PSMA1P25786 263 aaKnown RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CDKN2BP42772 138 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CHRNA4P43681 627 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 TAS2R39P59534 338 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 ERVS71-1P61550 626 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PIN1Q13526 163 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 TPBGQ13641 420 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 NTRK2Q16620 822 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 TAZQ16635 292 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 SLC22A10Q63ZE4 541 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 MFSD7Q6UXD7 560 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF730Q6ZMV8 503 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 UBE2R2Q712K3 238 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 KCNMB4Q86W47 210 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 VRK2Q86Y07 508 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 OR5L2Q8NGL0 311 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 THAP3Q8WTV1 239 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 EDEM1Q92611 657 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 GGHQ92820 318 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 MOCOSQ96EN8 888 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 DIRC2Q96SL1 478 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 RSRP1Q9BUV0 290 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CYSLTR2Q9NS75 346 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 UQCC1Q9NVA1 299 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 KLHL11Q9NVR0 708 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 UTS2RQ9UKP6 389 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 FAM50BQ9Y247 325 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PRSS21Q9Y6M0 314 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 A0A1B0GUH1 482 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 A0A1B0GV72 72 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PPP1R2P9O14990 202 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 GCGP01275 180 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 FGBP02675 491 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 POU2F2P09086 479 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF7P17097 686 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 GGT1P19440 569 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 NFYBP25208 207 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 SLC6A4P31645 630 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PSMB10P40306 273 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 SLC19A1P41440 591 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CRYBB2P43320 205 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 GYG1P46976 350 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 STXBP1P61764 594 aaKnown RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 SMN1Q16637 294 aaKnown RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 LRIF1Q5T3J3 769 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM71Q6P5X7 295 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 TMPRSS7Q7RTY8 843 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 ADIPOR2Q86V24 386 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 SLC41A1Q8IVJ1 513 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 SDR9C7Q8NEX9 313 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CSGALNACT1Q8TDX6 532 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 SMAP2Q8WU79 429 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 RTP4Q96DX8 246 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 GALNT14Q96FL9 552 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CPNE2Q96FN4 548 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CLCC1Q96S66 551 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 LPAR4Q99677 370 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 LRRC3Q9BY71 257 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 NMRAL1Q9HBL8 299 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 PRM3Q9NNZ6 103 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 ACSS2Q9NR19 701 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 UBQLN4Q9NRR5 601 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 RBM22Q9NW64 420 aaKnown RBP eCLIP8.26□□□□□ -1.09
COMMD3-215ENST00000602574 DDIT4Q9NX09 232 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 NDUFB11Q9NX14 153 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 MGAT4CQ9UBM8 478 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 CHRNA9Q9UGM1 479 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 COQ4Q9Y3A0 265 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 FLVCR1Q9Y5Y0 555 aa8.26□□□□□ -1.09
COMMD3-215ENST00000602574 ZSWIM8A7E2V4 1837 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 OR14I1A6ND48 311 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 NR5A2O00482 541 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 GNGT2O14610 69 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 PLRG1O43660 514 aaKnown RBP8.25□□□□□ -1.09
COMMD3-215ENST00000602574 SLCO2B1O94956 709 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 SIX3O95343 332 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms