RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 GPIP06744 558 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 UMPSP11172 480 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF17P17021 662 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 EIF1P41567 113 aaKnown RBP11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 MAGEA2P43356 314 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 TDGF1P3P51864 188 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 GFRA1P56159 465 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 ACTR3P61158 418 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 VLDLRP98155 873 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 FOXF1Q12946 379 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 OR1Q1Q15612 314 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 WIPI1Q5MNZ9 446 aaPredicted RBP11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF613Q6PF04 617 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 TRILQ7L0X0 811 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 PIWIL3Q7Z3Z3 882 aaKnown RBP11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 SPATA24Q86W54 205 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 CANT1Q8WVQ1 401 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 DUS3LQ96G46 650 aaKnown RBP11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 GPR137Q96N19 417 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 MCHR1Q99705 422 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 UGT2B28Q9BY64 529 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 POLR2J2Q9GZM3 115 aaKnown RBP11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 POLR2J3Q9H1A7 115 aaKnown RBP11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 DEFB127Q9H1M4 99 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 SLC6A15Q9H2J7 730 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 IL1RAPQ9NPH3 570 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 NDUFAF4Q9P032 175 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 ACAD8Q9UKU7 415 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 LIPGQ9Y5X9 500 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 ENPP4Q9Y6X5 453 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 NINQ8N4C6 2090 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 A0A0B4J2E0 115 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 A0A1B0GX12 115 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 OR2M5A3KFT3 312 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 TTLL8A6PVC2 850 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 SHISA8B8ZZ34 492 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 ANKRD65E5RJM6 399 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 NPIPA5E9PKD4 350 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 FFAR1O14842 300 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 EFNA2O43921 213 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 SUSD5O60279 629 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 HCN1O60741 890 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 PRSS23O95084 383 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 GP1BBP13224 206 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 COPZ1P61923 177 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 KPNB1Q14974 876 aaKnown RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 TOMM20Q15388 145 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 NHSL2Q5HYW2 709 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 ENTPD8Q5MY95 495 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 DEF8Q6ZN54 512 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 PLEKHM3Q6ZWE6 761 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 GRINAQ7Z429 371 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 ATG4DQ86TL0 474 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 CHERPQ8IWX8 916 aaKnown RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 CADM2Q8N3J6 435 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 PAPD5Q8NDF8 572 aaKnown RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 OR14L1PQ8NHC6 308 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF563Q8TA94 476 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 NEIL3Q8TAT5 605 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 SLCO4A1Q96BD0 722 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 C3orf49Q96BT1 292 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 SLC47A1Q96FL8 570 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 PRRC1Q96M27 445 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 ZNF300Q96RE9 604 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 SEPHS2Q99611 448 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 PIGQQ9BRB3 760 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 TSPAN10Q9H1Z9 355 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 DENND2DQ9H6A0 471 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 C12orf10Q9HB07 376 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 TMEM27Q9HBJ8 222 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 CCM2LQ9NUG4 571 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 ASF1BQ9NVP2 202 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 A4GNTQ9UNA3 340 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 NPIPA1Q9UND3 350 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 RPH3AQ9Y2J0 694 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 EML6Q6ZMW3 1958 aa11.44□□□□□ -0.58
CHMP2A-206ENST00000600118 TRGV5A0A0B4J1U4 118 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 TRAPPC13A5PLN9 417 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 LINC01387J3KSC0 135 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 hCG_2039718K7EN88 272 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 AQP7O14520 342 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 OR5F1O95221 314 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 RAP2AP10114 183 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 HOXB6P17509 224 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 TCEA1P23193 301 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 CHMP24386 653 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 ELK4P28324 431 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 TACR3P29371 465 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 APOBEC1P41238 236 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 HTR3AP46098 478 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 ERFP50548 548 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 POLR2HP52434 150 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 CHRNB3Q05901 458 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 MERTKQ12866 999 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 PIN1Q13526 163 aaPredicted RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 FAM98BQ52LJ0 330 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 SOWAHCQ53LP3 525 aaPredicted RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 KRTCAP3Q53RY4 240 aa11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 SWT1Q5T5J6 900 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-206ENST00000600118 RAET1LQ5VY80 246 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms