RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 IFNA14P01570 189 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 C8BP07358 591 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 LINGO3P0C6S8 592 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 GKN3PP0CG01 181 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 HK1P19367 917 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 ZNF136P52737 540 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 B3GALT5-AS1P59052 145 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 MS4A2Q01362 244 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 CBFBQ13951 182 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 TOMM20Q15388 145 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 NRF1Q16656 503 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 WIPI1Q5MNZ9 446 aaPredicted RBP17.06■□□□□ 0.32
CCDC9-205ENST00000600117 SP5Q6BEB4 398 aaPredicted RBP17.06■□□□□ 0.32
CCDC9-205ENST00000600117 TRILQ7L0X0 811 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 ASRGL1Q7L266 308 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 SPPL2CQ8IUH8 684 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 CHERPQ8IWX8 916 aaKnown RBP17.06■□□□□ 0.32
CCDC9-205ENST00000600117 MCEMP1Q8IX19 187 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 SLC26A7Q8TE54 656 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 RASSF5Q8WWW0 418 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 FAM162AQ96A26 154 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 DTNBP1Q96EV8 351 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 ARHGDIGQ99819 225 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 TAS2R10Q9NYW0 307 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 NAV3Q8IVL0 2385 aa17.06■□□□□ 0.32
CCDC9-205ENST00000600117 A0A087WZY1 265 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 A0A1B0GVC2 190 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 C7orf72A4D263 438 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 CFAP73A6NFT4 308 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 FAAHO00519 579 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 SERPINA1P01009 418 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 FESP07332 822 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 SLC6A8P48029 635 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 TRIM25Q14258 630 aaKnown RBP17.05■□□□□ 0.32
CCDC9-205ENST00000600117 QPRTQ15274 297 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 GLYR1Q49A26 553 aaPredicted RBP17.05■□□□□ 0.32
CCDC9-205ENST00000600117 CBLL1Q75N03 491 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 ZNF550Q7Z398 422 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 LACC1Q8IV20 430 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 ST6GALNAC3Q8NDV1 305 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 OR4D11Q8NGI4 311 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 OR10Q1Q8NGQ4 319 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 POC1BQ8TC44 478 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 RNF145Q96MT1 663 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 MUC13Q9H3R2 512 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 EVA1AQ9H8M9 152 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 ACTR3BQ9P1U1 418 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 BAG5Q9UL15 447 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 VDAC3Q9Y277 283 aa17.05■□□□□ 0.32
CCDC9-205ENST00000600117 RPH3AQ9Y2J0 694 aaPredicted RBP17.05■□□□□ 0.32
CCDC9-205ENST00000600117 DNAJC13O75165 2243 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 MED12Q93074 2177 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 TRGV5A0A0B4J1U4 118 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 SHISA8B8ZZ34 492 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 M0R3H8 397 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 HCN1O60741 890 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 NTN1O95631 604 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 NUDT14O95848 222 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 PRKCAP17252 672 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 PGCP20142 388 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 ATP6V1B2P21281 511 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 TCEA1P23193 301 aaKnown RBP17.04■□□□□ 0.32
CCDC9-205ENST00000600117 PSMA4P25789 261 aaKnown RBP17.04■□□□□ 0.32
CCDC9-205ENST00000600117 RYKP34925 604 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 ZNF41P51814 821 aaPredicted RBP17.04■□□□□ 0.32
CCDC9-205ENST00000600117 GFRA1P56159 465 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 DLX5P56178 289 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 SELENOWP63302 87 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 HOXC5Q00444 222 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 HSF1Q00613 529 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 NPTX1Q15818 432 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 KRTAP21-3Q3LHN1 58 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 KRTCAP3Q53RY4 240 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 SLC25A53Q5H9E4 307 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 FGD2Q7Z6J4 655 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 ULK2Q8IYT8 1036 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 OR52E4Q8NGH9 312 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 OR14L1PQ8NHC6 308 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 NEIL3Q8TAT5 605 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 DCAF13Q9NV06 445 aaKnown RBP17.04■□□□□ 0.32
CCDC9-205ENST00000600117 KLHL28Q9NXS3 571 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 SPRR3Q9UBC9 169 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 SLC6A5Q9Y345 797 aa17.04■□□□□ 0.32
CCDC9-205ENST00000600117 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 ACOT8O14734 319 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 LRRTM2O43300 516 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 SUSD5O60279 629 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 TPST2O60704 377 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 GMNNO75496 209 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 EDN3P14138 238 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 TNFRSF1BP20333 461 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 RGS8P57771 180 aaPredicted RBP17.03■□□□□ 0.32
CCDC9-205ENST00000600117 SESN3P58005 492 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 FOXF1Q12946 379 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 LCN8Q6JVE9 175 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 VTCN1Q7Z7D3 282 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 EID3Q8N140 333 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 GHDCQ8N2G8 530 aa17.03■□□□□ 0.32
CCDC9-205ENST00000600117 GTPBP8Q8N3Z3 284 aaPredicted RBP17.03■□□□□ 0.32
CCDC9-205ENST00000600117 OR6T1Q8NGN1 323 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms