RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PKDREJQ9NTG1 2253 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 NOTCH2Q04721 2471 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 SYT5O00445 386 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 CRHP06850 196 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 PRF1P14222 555 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 IGFBP2P18065 325 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 MRPL2Q5T653 305 aaKnown RBP25.3■■□□□ 1.64
SSBP4-206ENST00000599699 DLEU7Q6UYE1 221 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 DHDDSQ86SQ9 333 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 VRK2Q86Y07 508 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 DMRTC2Q8IXT2 367 aaPredicted RBP25.3■■□□□ 1.64
SSBP4-206ENST00000599699 TSPEARQ8WU66 669 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 RNASE6Q93091 150 aaKnown RBP25.3■■□□□ 1.64
SSBP4-206ENST00000599699 TIGARQ9NQ88 270 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 ACER3Q9NUN7 267 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 MRGBPQ9NV56 204 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 DNAJB12Q9NXW2 375 aaKnown RBP25.3■■□□□ 1.64
SSBP4-206ENST00000599699 ZNF232Q9UNY5 417 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 DSPPQ9NZW4 1301 aa25.3■■□□□ 1.64
SSBP4-206ENST00000599699 INTS1Q8N201 2190 aaKnown RBP25.29■■□□□ 1.64
SSBP4-206ENST00000599699 TRBV5-3A0A0A0MS03 114 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 ETV2O00321 342 aaPredicted RBP25.29■■□□□ 1.64
SSBP4-206ENST00000599699 AQP8O94778 261 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 BMP2P12643 396 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 SLC7A1P30825 629 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 CPA2P48052 419 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 SIRPAP78324 504 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 NFYCQ13952 458 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 LARS2Q15031 903 aaKnown RBP25.29■■□□□ 1.64
SSBP4-206ENST00000599699 GDF7Q7Z4P5 450 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 LUZP2Q86TE4 346 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 ACBD4Q8NC06 268 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 PIGMQ9H3S5 423 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 RNF122Q9H9V4 155 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 KLHL14Q9P2G3 628 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 MAST4O15021 2626 aa25.29■■□□□ 1.64
SSBP4-206ENST00000599699 PLGP00747 810 aaPredicted RBP25.28■■□□□ 1.64
SSBP4-206ENST00000599699 UQCRBP14927 111 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 IDH2P48735 452 aaKnown RBP25.28■■□□□ 1.64
SSBP4-206ENST00000599699 DLX5P56178 289 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 PLAURQ03405 335 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 C3orf33Q6P1S2 294 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 ZNF836Q6ZNA1 936 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 PLEKHM3Q6ZWE6 761 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 RETREG3Q86VR2 466 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 DPP10Q8N608 796 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 NFKBIDQ8NI38 313 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 BBS10Q8TAM1 723 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 REXO5Q96IC2 774 aaKnown RBP25.28■■□□□ 1.64
SSBP4-206ENST00000599699 TRIM8Q9BZR9 551 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 IKZF5Q9H5V7 419 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 RLIMQ9NVW2 624 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 PACSIN3Q9UKS6 424 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 ZNF443Q9Y2A4 671 aaPredicted RBP25.28■■□□□ 1.64
SSBP4-206ENST00000599699 HCFC1P51610 2035 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 NAV2Q8IVL1 2488 aa25.28■■□□□ 1.64
SSBP4-206ENST00000599699 AP3D1O14617 1153 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 TNFSF13O75888 250 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 SMNDC1O75940 238 aaKnown RBP eCLIP25.27■■□□□ 1.64
SSBP4-206ENST00000599699 SNTB1Q13884 538 aaKnown RBP25.27■■□□□ 1.64
SSBP4-206ENST00000599699 FBXL19-AS1Q494R0 122 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 RUNDC3AQ59EK9 446 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 PRAMEF8Q5VWM4 474 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 PRAMEF7Q5VXH5 474 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 ZNF440Q8IYI8 595 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 ZNF317Q96PQ6 595 aaPredicted RBP25.27■■□□□ 1.64
SSBP4-206ENST00000599699 CPPED1Q9BRF8 314 aaPredicted RBP25.27■■□□□ 1.64
SSBP4-206ENST00000599699 ARMC7Q9H6L4 198 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 SAR1AQ9NR31 198 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 FOXD3Q9UJU5 478 aaPredicted RBP25.27■■□□□ 1.64
SSBP4-206ENST00000599699 IFT52Q9Y366 437 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 HEATR5AQ86XA9 2040 aa25.27■■□□□ 1.64
SSBP4-206ENST00000599699 CFAP73A6NFT4 308 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 ARAFP10398 606 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 APOBEC1P41238 236 aaKnown RBP25.26■■□□□ 1.63
SSBP4-206ENST00000599699 MYBPHQ13203 477 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 GRINAQ7Z429 371 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 C10orf111Q8N326 155 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 OR5B2Q96R09 309 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 CGREF1Q99674 301 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 RBM24Q9BX46 236 aaKnown RBP25.26■■□□□ 1.63
SSBP4-206ENST00000599699 SLC24A3Q9HC58 644 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 BCL2L10Q9HD36 194 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 CTPS2Q9NRF8 586 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 JKAMPQ9P055 326 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 SPIN1Q9Y657 262 aaPredicted RBP25.26■■□□□ 1.63
SSBP4-206ENST00000599699 GMEB1Q9Y692 573 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 CACNA1DQ01668 2161 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 ITPR2Q14571 2701 aa25.26■■□□□ 1.63
SSBP4-206ENST00000599699 MED12LQ86YW9 2145 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 CDHR4A6H8M9 788 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 ADAM11O75078 769 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 PGM3O95394 542 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 THBS1P07996 1170 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 TFPIP10646 304 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 GPX2P18283 190 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 CDK6Q00534 326 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 KLF10Q13118 480 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 MMEL1Q495T6 779 aa25.25■■□□□ 1.63
SSBP4-206ENST00000599699 ZNF311Q5JNZ3 666 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms