RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 GGT1P19440 569 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 PCLAFQ15004 111 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 NDUFAF6Q330K2 333 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 CHRFAM7AQ494W8 412 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 BHLHB9Q6PI77 547 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 GALNT5Q7Z7M9 940 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 TMEM158Q8WZ71 300 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 ST8SIA1Q92185 356 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 PRPF18Q99633 342 aaKnown RBP18.71■□□□□ 0.59
PNKP-212ENST00000599454 NMUR2Q9GZQ4 415 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 C12orf65Q9H3J6 166 aaKnown RBP18.71■□□□□ 0.59
PNKP-212ENST00000599454 ANKZF1Q9H8Y5 726 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 GDF2Q9UK05 429 aaPredicted RBP18.71■□□□□ 0.59
PNKP-212ENST00000599454 MGAT4BQ9UQ53 548 aa18.71■□□□□ 0.59
PNKP-212ENST00000599454 OR5H1A6NKK0 313 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 DNAJA2O60884 412 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 NDUFS7O75251 213 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 KRT4P19013 534 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 IGHV1-2P23083 117 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 RNF144AP50876 292 aaPredicted RBP18.7■□□□□ 0.58
PNKP-212ENST00000599454 CCR4P51679 360 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 C21orf58P58505 322 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 DSCR9P59020 149 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 CSNK2A1P68400 391 aaPredicted RBP18.7■□□□□ 0.58
PNKP-212ENST00000599454 UGT3A2Q3SY77 523 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 TIGD2Q4W5G0 525 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 ZNF100Q8IYN0 542 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 RFWD2Q8NHY2 731 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 OR5B2Q96R09 309 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 OR7D2Q96RA2 312 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 ZNF300Q96RE9 604 aaPredicted RBP18.7■□□□□ 0.58
PNKP-212ENST00000599454 LAT2Q9GZY6 243 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 EML4Q9HC35 981 aaKnown RBP18.7■□□□□ 0.58
PNKP-212ENST00000599454 SERINC1Q9NRX5 453 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 EMC3Q9P0I2 261 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 B3GALT5Q9Y2C3 310 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 TRAF6Q9Y4K3 522 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 KCNE3Q9Y6H6 103 aa18.7■□□□□ 0.58
PNKP-212ENST00000599454 SERINC4A6NH21 518 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 DUXAA6NLW8 204 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 ESPNB1AK53 854 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 PIP5K1BO14986 540 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 SSX4O60224 188 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 NPHS1O60500 1241 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 C6orf47O95873 294 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 AK1P00568 194 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 NUDT6P53370 316 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 PDK3Q15120 406 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 TMEM108Q6UXF1 575 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 SLC25A43Q8WUT9 341 aaPredicted RBP18.69■□□□□ 0.58
PNKP-212ENST00000599454 TMEM234Q8WY98 164 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 ZNF75CPQ92670 426 aaPredicted RBP18.69■□□□□ 0.58
PNKP-212ENST00000599454 COQ8BQ96D53 544 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 SDF2Q99470 211 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 NPAP1Q9NZP6 1156 aa18.69■□□□□ 0.58
PNKP-212ENST00000599454 IGKV3D-15A0A087WSY6 115 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 H6PDO95479 791 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 SHBGP04278 402 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 PTGR1Q14914 329 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 ZNF141Q15928 474 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 ATP6AP1LQ52LC2 224 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 XKR7Q5GH72 579 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 PDZK1Q5T2W1 519 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 CLEC2AQ6UVW9 174 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 TMPPEQ6ZT21 453 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 PHC2Q8IXK0 858 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 ZNF433Q8N7K0 673 aaPredicted RBP18.68■□□□□ 0.58
PNKP-212ENST00000599454 OR2W6PQ8NHA6 318 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 ZNF524Q96C55 264 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 THUMPD3Q9BV44 507 aaKnown RBP18.68■□□□□ 0.58
PNKP-212ENST00000599454 BHLHE41Q9C0J9 482 aaPredicted RBP18.68■□□□□ 0.58
PNKP-212ENST00000599454 CBLN4Q9NTU7 201 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.68■□□□□ 0.588e-10■■■■■ 38.7
PNKP-212ENST00000599454 ARFGEF3Q5TH69 2177 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 MALRD1Q5VYJ5 2156 aa18.68■□□□□ 0.58
PNKP-212ENST00000599454 TMEM233B4DJY2 109 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 CHRNGP07510 517 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 PGCP20142 388 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 PRPS1L1P21108 318 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 PTAFRP25105 342 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 TTKP33981 857 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 DIO1P49895 249 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 SKP2Q13309 424 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 FBXW9Q5XUX1 488 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 ABLIM2Q6H8Q1 611 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 KLHL17Q6TDP4 642 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 C4orf33Q8N1A6 199 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 OR10H5Q8NGA6 315 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 UBLCP1Q8WVY7 318 aaPredicted RBP18.67■□□□□ 0.58
PNKP-212ENST00000599454 ZHX1-C8orf76Q96EF9 292 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 DHRS9Q9BPW9 319 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 CACNG6Q9BXT2 260 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 MKS1Q9NXB0 559 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 CDC42EP3Q9UKI2 254 aa18.67■□□□□ 0.58
PNKP-212ENST00000599454 SPIN1Q9Y657 262 aaPredicted RBP18.67■□□□□ 0.58
PNKP-212ENST00000599454 IGHV4-30-2A0A087WSY4 118 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 C9JVG2 144 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 SULT2B1O00204 365 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 CFLARO15519 480 aa18.66■□□□□ 0.58
PNKP-212ENST00000599454 PEX11AO75192 247 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms