RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 MED12Q93074 2177 aa10.87□□□□□ -0.67
ARHGEF1-216ENST00000598587 PCNX1Q96RV3 2341 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 LOC100653049A0A140TA62 436 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 CDHR4A6H8M9 788 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 ETV2O00321 342 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 FAAHO00519 579 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 DCTN3O75935 186 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 KRT34O76011 436 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 SYNGR4O95473 234 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 NUDT7P0C024 238 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 TMIGD3P0DMS9 266 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 COX4I1P13073 169 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 PSMA4P25789 261 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 HTR1EP28566 365 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 PRKAR1BP31321 381 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 CEACAM8P31997 349 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 RYKP34925 604 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 OPRM1P35372 400 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 APOBEC1P41238 236 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 EIF1AXP47813 144 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 CLDN15P56746 228 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 CLDN20P56880 219 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 COPZ1P61923 177 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 MERTKQ12866 999 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 CAPRIN1Q14444 709 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 MAPK11Q15759 364 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 HBMQ6B0K9 141 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 NANOGP8Q6NSW7 305 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 PPP4R4Q6NUP7 873 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 GRINAQ7Z429 371 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 HMGN2P46Q86SG4 172 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 VRK2Q86Y07 508 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 TNIP2Q8NFZ5 429 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 OR2V1Q8NHB1 315 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 LILRB4Q8NHJ6 448 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 POC1BQ8TC44 478 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 CNOT9Q92600 299 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 KLHL15Q96M94 604 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 CCDC106Q9BWC9 280 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 PRRG4Q9BZD6 226 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 IKZF5Q9H5V7 419 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 TMEM185BQ9H7F4 350 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 KAT8Q9H7Z6 458 aaKnown RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 NANOGQ9H9S0 305 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 ACER3Q9NUN7 267 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 KLHL28Q9NXS3 571 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 ZNF629Q9UEG4 869 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 ARL2BPQ9Y2Y0 163 aa10.86□□□□□ -0.67
ARHGEF1-216ENST00000598587 PTPN13Q12923 2485 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 INTS1Q8N201 2190 aaKnown RBP10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 ICE1Q9Y2F5 2266 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 CLDN24A6NM45 220 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 FAM90A27PA6NNH2 459 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 TNFSF11O14788 317 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 RCBTB2O95199 551 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 NTN1O95631 604 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 CRHP06850 196 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 CD1EP15812 388 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 BMP5P22003 454 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 CTSSP25774 331 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 SFTPDP35247 375 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 IDH2P48735 452 aaKnown RBP10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 MAP2K6P52564 334 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 SESN3P58005 492 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 NCALDP61601 193 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 EPS8Q12929 822 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 PON3Q15166 354 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 TOMM34Q15785 309 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 ERICH5Q6P6B1 374 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 PLEKHM3Q6ZWE6 761 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 NET1Q7Z628 596 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 PATL1Q86TB9 770 aaKnown RBP10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 GGNQ86UU5 652 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 ARMC8Q8IUR7 673 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 CCDC71Q8IV32 467 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 OR10D3Q8NH80 312 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 RASSF5Q8WWW0 418 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 CPNE4Q96A23 557 aaPredicted RBP10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 RCN3Q96D15 328 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 EFCAB1Q9HAE3 211 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 CHRNA9Q9UGM1 479 aa10.85□□□□□ -0.67
ARHGEF1-216ENST00000598587 SPTBN1Q01082 2364 aaKnown RBP10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 NDUFAB1O14561 156 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 ADAMDEC1O15204 470 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 IL18BPO95998 194 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 PLGP00747 810 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 PRDX6P30041 224 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 PCGF2P35227 344 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 SLC1A3P43003 542 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 ASCL1P50553 236 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 POLR2HP52434 150 aaKnown RBP10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 SUCLG1P53597 346 aaKnown RBP10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 DLX5P56178 289 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 CARD18P57730 90 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 CSNK2A1P68400 391 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 SELPLGQ14242 412 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 GKAP1Q5VSY0 366 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 GTF2IRD2BQ6EKJ0 949 aa10.84□□□□□ -0.67
ARHGEF1-216ENST00000598587 WBP2NLQ6ICG8 309 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms