RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 KCNN3Q9UGI6 736 aa18.91■□□□□ 0.62
PNKP-209ENST00000596726 MPDZO75970 2070 aa18.91■□□□□ 0.62
PNKP-209ENST00000596726 TACC2O95359 2948 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 EEF1E1-BLOC1S5C9J1V9 151 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 EEF1E1O43324 174 aaKnown RBP18.9■□□□□ 0.62
PNKP-209ENST00000596726 NUDT7P0C024 238 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 FCGR2AP12318 317 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 UQCRC1P31930 480 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 SFTPDP35247 375 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 DLEU7Q6UYE1 221 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 PEX5LQ8IYB4 626 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 OSTF1Q92882 214 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 TMEM19Q96HH6 336 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 SLC24A3Q9HC58 644 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 A4GALTQ9NPC4 353 aa18.9■□□□□ 0.62
PNKP-209ENST00000596726 DNAJB12Q9NXW2 375 aaKnown RBP18.9■□□□□ 0.62
PNKP-209ENST00000596726 LEF1Q9UJU2 399 aaPredicted RBP18.9■□□□□ 0.62
PNKP-209ENST00000596726 ANKHD1Q8IWZ3 2542 aaKnown RBP18.89■□□□□ 0.61
PNKP-209ENST00000596726 A0A0G2JPF8 293 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 GJE1A6NN92 205 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 A8MXE2 369 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 HNRNPCL2B2RXH8 293 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 HNRNPCL3B7ZW38 293 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 HNRNPCL1O60812 293 aaKnown RBP18.89■□□□□ 0.61
PNKP-209ENST00000596726 VIMP08670 466 aaKnown RBP18.89■□□□□ 0.61
PNKP-209ENST00000596726 HNRNPCL4P0DMR1 293 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 IL7RP16871 459 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 PPIBP23284 216 aaKnown RBP18.89■□□□□ 0.61
PNKP-209ENST00000596726 PEX19P40855 299 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 MDH1P40925 334 aaKnown RBP18.89■□□□□ 0.61
PNKP-209ENST00000596726 CARD18P57730 90 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 GNA13Q14344 377 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 TMEM176BQ3YBM2 270 aaPredicted RBP18.89■□□□□ 0.61
PNKP-209ENST00000596726 PRAMEF8Q5VWM4 474 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 PRAMEF7Q5VXH5 474 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 VWA1Q6PCB0 445 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 PLEKHM3Q6ZWE6 761 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 C10orf111Q8N326 155 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 DPP10Q8N608 796 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 OR52P1PQ8NH57 321 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 COQ10BQ9H8M1 238 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 BCL2L10Q9HD36 194 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 PACSIN3Q9UKS6 424 aa18.89■□□□□ 0.61
PNKP-209ENST00000596726 MCTS1Q9ULC4 181 aaKnown RBP18.89■□□□□ 0.61
PNKP-209ENST00000596726 MSTNO14793 375 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 SYNGR4O95473 234 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 GPX2P18283 190 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 RYKP34925 604 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 ARFIP2P53365 341 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 RPS26P11Q5JNZ5 115 aaPredicted RBP18.88■□□□□ 0.61
PNKP-209ENST00000596726 MRPL2Q5T653 305 aaKnown RBP18.88■□□□□ 0.61
PNKP-209ENST00000596726 BTLAQ7Z6A9 289 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 RETREG3Q86VR2 466 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 VRK2Q86Y07 508 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 CCDC106Q9BWC9 280 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 RBM24Q9BX46 236 aaKnown RBP18.88■□□□□ 0.61
PNKP-209ENST00000596726 PRRG4Q9BZD6 226 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 IKZF5Q9H5V7 419 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 NDUFAF1Q9Y375 327 aa18.88■□□□□ 0.61
PNKP-209ENST00000596726 CDHR4A6H8M9 788 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 TMEM247A6NEH6 219 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 FAAHO00519 579 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 AP3D1O14617 1153 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 CGAP01215 116 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 THBS1P07996 1170 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 ARAFP10398 606 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 APOBEC1P41238 236 aaKnown RBP18.87■□□□□ 0.61
PNKP-209ENST00000596726 MERTKQ12866 999 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 SNTB1Q13884 538 aaKnown RBP18.87■□□□□ 0.61
PNKP-209ENST00000596726 LIN52Q52LA3 116 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 RUNDC3AQ59EK9 446 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 C3orf33Q6P1S2 294 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 ZNF836Q6ZNA1 936 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 FAM214BQ7L5A3 538 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 LUZP2Q86TE4 346 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 CNEP1R1Q8N9A8 125 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 ATP6V1C2Q8NEY4 427 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 ZNF563Q8TA94 476 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 MAL2Q969L2 176 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 CPNE4Q96A23 557 aaPredicted RBP18.87■□□□□ 0.61
PNKP-209ENST00000596726 GMPPAQ96IJ6 420 aaPredicted RBP18.87■□□□□ 0.61
PNKP-209ENST00000596726 CPPED1Q9BRF8 314 aaPredicted RBP18.87■□□□□ 0.61
PNKP-209ENST00000596726 SRXN1Q9BYN0 137 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 SERINC1Q9NRX5 453 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 ZNF443Q9Y2A4 671 aaPredicted RBP18.87■□□□□ 0.61
PNKP-209ENST00000596726 PDZD2O15018 2839 aa18.87■□□□□ 0.61
PNKP-209ENST00000596726 SS18L1O75177 396 aaPredicted RBP18.86■□□□□ 0.61
PNKP-209ENST00000596726 PGM3O95394 542 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 CD8BP10966 210 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 IDH2P48735 452 aaKnown RBP18.86■□□□□ 0.61
PNKP-209ENST00000596726 PCYT1AP49585 367 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 SIRPAP78324 504 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 SORDQ00796 357 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 TLE4Q04727 773 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 EPS8Q12929 822 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 ZNF239Q16600 458 aaKnown RBP18.86■□□□□ 0.61
PNKP-209ENST00000596726 ZSWIM7Q19AV6 140 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 GCNT6Q5T4J0 391 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 RNF220Q5VTB9 566 aa18.86■□□□□ 0.61
PNKP-209ENST00000596726 GRINAQ7Z429 371 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms